GitLab

* Add test cases for full coverage in jax/test_layer.py
- causal and window size None
- causal and window size default (-1,1)
- no_mask and window size default (-1,1)
- no_mask and window size default (2,2)
- padding and window size None
- padding_causal and window_size (2,2)
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* Correct the condition where padding_causal_mask was being mapped to scaled upper triangle
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* Fix Issue #1524
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* Add a runner and test cases for jax.flax.module.Softmax class for fwd pass only
Segregate runner classes for Softmax module and softmax primitives
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* Simplify logic when picking softmax primitives and softmax jax framework calls
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci



* Simplify the logic for performing jax based softmax
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* Code clean up
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* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci



* Add support table for mask, SWA and Softmax type. Code linting
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci



* Explicit SWA conditons in comments. Fix Typo
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci



* Resolve typo to remove None in SWA comments section
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci



---------
Signed-off-by: Kshitij Janardan Lakhani <klakhani@nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* scaling enum abstract

* rm NVTE_ from ScalingMode names

* rework scaling mode enum in grouped gemm

* fix norm sharding

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* rename QuantizeAxis to QuantizeLayout, get_layout to get_data_layout, q_axis to q_layout

* add fatten_axis option

* added gated act to test encoder

* sharding constraint fixes

* fix padding when flattening first dim needs to be padded

* update test sizes so that padding is tested

* rm output sharding as it can be done in the flax module

* sharding scale_inv for mxfp8

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

MXFP8 flax layer tests
Signed-off-by: Jeremy Berchtold <jberchtold@nvidia.com>

* refactor + mxfp8

* added grouped gemm

* rename linear to dense

* added cublas init phase for groupedGemm

* relax the tol of test encoder multiprocessing mxfp8 by 0.001
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>
Co-authored-by: Hua Huang <huah@nvidia.com>
Co-authored-by: Jeremy Berchtold <jberchtold@nvidia.com>

flax module with compute dtype inferred from the inputs
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

JAX Lint Fix
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* initialization with weight_dtype
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>
---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* flax module to init params with given dtype
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* all tests passed
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* remove unneccessary reshape for kernel
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* remove casting output of dot
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* clean up
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Link attention docs to the main docs and fix errors reported by Sphinx
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* Lower the version of nbsphinx
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* More fixes
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* Change the URL of example_attention.py to GitHub
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* More fixes in the attention tutorial
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---------
Signed-off-by: Przemek Tredak <ptredak@nvidia.com>

* Apply formatting
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* Apply formatting
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

---------
Signed-off-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Splitted cpp_extensions.py, renamed mlp.py and fused_attn.py
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixed import in tests
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Reformat FP8 Meta

1. Reformat FP8 meta to be one-set-per-tensor.
2. Remove fp8_max and scale_inv.
3. Remove unused functions in fp8.py
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix unit-tests
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Remove ShardingType and MajorShardingType
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* Fix lint errors
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* Fixed unittests.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Rename few variables.
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* Add jit to update_amax_list
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fixed naming error in LayernormMLP
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fixed bugs in test_distributed_layernorm_mlp.py
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>

- Made order of gated act consistent in all branches
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Fixed the shape mismatching issue in MLP.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Add a corresponding test
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Co-authored-by: Phuong Nguyen <36155692+phu0ngng@users.noreply.github.com>

* renamed gelu to act

* added relu, srelu, qgelu

* fixes initialization for layernorm_fp8_mlp tests

* moved activation_fp8 prim into testunit file

* Moved NVTE_Activation_Enum to common/.../activation.h

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* templated primitives and respective C++ functions
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixes for LayerNormMLP, tests in test_custom_compute all passed
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* added default arg for pybind get_workspace_size funcs
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixes for TestTransFormer with non-gated act tests
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* renamed gelu to act
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* improved enum implementation, avoid using magic numbers
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Exposed C++ ActivationEnum to python side
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Changed error messages
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* changed conditional check on input shape for dbias_cast_transpose
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* changed dtype (tol) for bias grad tests
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixes so that layer_norm_fp8_mlp can take bias = None
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Set bias = None in flax modules
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Add layernorm_fp8_dot unit test
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Update the softmax primitives support conditions
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add tests for the softmax primitives
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Round1 refactor of test_layer
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Split dropout arguments of ref code and add hidden/intermediate dropout elementwise comparison
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add dropout_braodcast_dim, self_attn_mask tests and clean a few code
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Abstract test layer and fix a rope reference code diff
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add bias tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add epsilon and float32 tests
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* Add relpos_bias and attention dropout tests
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* Loose the atol
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* Move common fixtures to conftest.py
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* Add doc string for test_layer
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* Add doc string for test_layer
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* Fix conflicts of test_layer
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* Avoid to left bias parameters in graph when use_bias=False
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Implemented swiglu and silu
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Renamed nvte-*silu to nvte-*swish + generalized GetDBiasDact functions
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* combined layernorm_geglu with layernorm_gelu into fused_layernorm
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixes to pass all unit tests in test_custom_call_compute.py,
test_layer.py, and test_praxis_layer.py
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* cleaning and formatting
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* renaming based on reviewers suggestions
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* implemented partial fused layernorm
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* geglu + bias passed tests
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* added partial fused calculation for dbias_1
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* clean up
Co-authored-by: Alp Dener <adener@nvidia.com>
Signed-off-by: Phuong Nguyen <36155692+phu0ngng@users.noreply.github.com>

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>
Signed-off-by: Phuong Nguyen <36155692+phu0ngng@users.noreply.github.com>
Co-authored-by: Alp Dener <adener@nvidia.com>

* Adding support of sequence parallelism
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding RoPE
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix wrong batch_logical_axes
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Rnaming FSDP outer env var
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* Poring RoPE to Praxis layers.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Porting GeLU + [FP8 Cast].
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* WAR to make XLA successfully match FP8 GEMM on FFN1 with GeLU.
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* Allowing arbitrary dimension of NVShape for the workspace allocation
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding checkpoint_name to fused functions of mlp.py to get better perf with nn.scan.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Modify with review feedback.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix bugs
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* Fix typo.
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* Fixed for lint
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* Follow review feedback to modify code.
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* Fix typo.
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* Port SP to Praxis
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* Fix an issue when enabling both GQA and RoPE.
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* Update docs
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Removed cudaMalloc/WorkspaceManager in JAX csrc. JAX custom ops now request buffers from XLA for their workspace tensors.
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* removed unused GEMM C++ API in TE-JAX
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* fixed typo in layernorm_geglu_fp8_mlp and removed unnecessary shape reductions in primitives
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* fixed import order for linting
Signed-off-by: Alp Dener <adener@nvidia.com>

* fixed custom op errors due to incorrect static arg nums in JAX jit
Signed-off-by: Alp Dener <adener@nvidia.com>

* shifted cudnnSetStream further down the kernel to avoid error when executing dummy kernel call with nullptr stream
Signed-off-by: Alp Dener <adener@nvidia.com>

* fixed linting errors for blank lines
Signed-off-by: Alp Dener <adener@nvidia.com>

---------
Signed-off-by: Alp Dener <adener@nvidia.com>

* Adding Cast custom call
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Applying cast to the kernel of layernorm_fp8_dot
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Applying native cast to the kernel of fp8_dot.
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* Apply Cast and native cast to layernorm_geglu_fp8_dot
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix the bug to enable layernorm_geglu_fp8_dot in LayernormMlp
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Modifiied code with the review feedback.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding 2xACC control to FP8 GEMMs.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Set precision as an static arg
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>

Signed-off-by: Przemek Tredak <ptredak@nvidia.com>

Add checkpoint_name
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refactor sharding.py for the further custom_partitioning migration
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Migrating both FWD and BWD of LayerNorm/RMSNorm from xmap to custom_partitioning.
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Migrating both FWD and BWD of all kinds of softmax from xmap to custom_partitioning.
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Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fix the wrong order of parameters to LN/RMSN bwd in ln_mlp_fp8.
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Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* WAR to LN/RMSN_fp8 before migrating to CP.
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Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fix the wrong order of parameters of bwd of LN/RMSN_fp8.
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Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Following review feedback to modify
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Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Force the hidden dim in Norm ops to no sharding and add warning msg.
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Reuse fwd_rule in VJP functions
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Migrating both FWD and BWD of self-fused-attn from xmap to custom_partitioning.
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Migrating both FWD and BWD of cross-fused-attn from xmap to custom_partitioning.
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* add gelu and dgelu.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Reuse fwd_rule in VJP functions for attentions
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Apply native FP8 Dtypes to fp8.py
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Migrating cast_and_transpose from xmap to custom_partitioning
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Migrating transpose from xmap to custom_partitioning
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Apply XLA pattern match to perform FP8 GEMM.
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* migrate layernorm_fp8 to custom_partitioning.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Unify code style
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Extend supported of Transpose with FP8
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Implementing layernorm_fp8_dot based on migrated custom calls.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Renaming variables and publish NVTE_FP8_COLLECTION_NAME
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Replace Q/DQ custom calls with native XLA implementations
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* migrate gelu_fp to custom_partitioning.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Miner fix
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Support custom calls with mutli-dims
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Support gerneral dot indices in _fp8_dot_impl
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Implementing layernrom_geglu_fp8_mlp
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Remove GEMM custom calls
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Remove xmap related code
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fix typo and add query-function to FP8MetaPackage
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fix some bugs of custom calls
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fix CT's bugs
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Update UTs/eaxmaples to adapt to the API changes.
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Unify kernel initilization in MLP.
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Modifing with code review's feedback
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Update README and Add deprecating warning to *ShardingType
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Canonicalize the dtype
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding assertion for non-supported batch dims.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding doc/examples to _multidim_transpose
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Set FP8 meta as WeightHParamsCollection.OVERWRITE_WITH_GRADIENT in Praxis modules.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Set FP8 meta as WeightHParamsCollection.OVERWRITE_WITH_GRADIENT in Praxis modules.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Apply dtype-based rtol/atol to UTs
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Deprecate QKV_INTERLEAVED enum
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Skip test_distributed_custom_ops.py
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix the wrong sharding of bias in SelfAttn
Signed-off-by: Ming Huang <mingh@nvidia.com>

* WAR to fix the wrong cu_seqlen of MHA when DP/FSDP enabled
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding distributed ops unit-tests
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding license to test_distributed_*
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Follow review feedback to modify
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Use total bytes involved in collective ops as criteria.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Co-authored-by: Donglin Yang <dongliny@nvidia.com>

[C/JAX] Support more mask types for the arbitrary seqlen kernels and minor changes of JAX bias (#469)

* Move bias to float32
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Enable varlen
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Increase neg infinity abs values
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Enable varlen tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove unnecessary code
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix lint
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Support variable sequence length after cuDNN 8.9.6
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Use unique_ptr instead of shared_ptr
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add a new mask type: PADDING_CAUSAL_MASK
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Support flash padding mask after 8.9.6
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Enhance the Max512 handling for causal masking and add the related tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Update the fused attn support lists
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove padding_aware from the caching
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix libtransformer.so issue
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Reduce the pad ratio tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix a bug with cuDNN 8.9.5
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Release backend resource after the module level unit test
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Clean the jax live arrays before running the unit tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix too-few-public-methods lint
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>

* [JAX] Enhance Dropout in TransformerLayer.

1. Fixed missing setup of dropout RNG key in TransformerLayer and
   LayerNormMLP.
2. Allowing seperated dropout rate for FC1's output and other hiddens.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix wrong fp8 scale in _update_fp8_metas_impl
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix typo
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

[JAX] Fix missing axes parameters in TransformerLayer and the wrong shape of bias in LayerNormMLP (#196)

Fixed missing axes and wrong shape of bias in LayerNormMLP
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adjust Module Structure.

1. Collect Flax related modules to a sub-folder, flax.
2. Add a function to unify scale_init for zero-centered-gamma LN.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Make changes be compatible to previous versions.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adapt jax/examples to the new module structure.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Update jax/docs and Add deprecated warning.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Update README
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding deprecated_wrapper
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding deprecated warning to flax modules which imported via transformer_engine.jax
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix CI errors and update docs.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Removing unnecessary deprecated warning in docs.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Implementing __iter__ to DeprecatedEnum.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* Allow update_collections and update_fp8_metas to return both Dict and FrozenDict.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix the wrong shape issue of bias when fused QKV or KV.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Reuse tuplized features for bias creating.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Replace get_args to be more readable.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Add zero_center_gamma/functional pass
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add zero_centered_gamma for fp8_ln_mlp
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add zero_centered_gamma to modules
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add zero_centered_gamma to TransformerLayer
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refactored code style for improved readability and consistency
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Docs enhancement for zero_centered_gamma
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add escape for line break and remove some bad if conditions
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Revise scale_init docs
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>

* Rename enable_fp8 to is_fp8_enabled.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding an API to get an instance of  DelayedScaling which is set via fp8_autocast.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Support transpose_bs when decoded=True
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix Bugs,

1. Fix missing dropout_dims in LayerNormMLP.
2. Fix broadcast issues in decoded.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix wrong masks in decoded.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fixed wrong assert condition in TransformerLayer
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix amax is not set as 0 in each step.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Enhance rules conflict checking and docs.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* fix code formatting.
Signed-off-by: Ming Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Signed-off-by: Ming Huang <mingh@nvidia.com>

* refactor JAX examples
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix doc-string
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add dp example
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* fix params_axes_pspec
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Add model parallel example and refactor
Update readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* align code and readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* update verification
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add mask
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* num_gpu is configurable
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* update readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* update readme
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* solvepylint issue
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* ignore markdown and txt file from license check
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update README.md
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* add flax into requirements.txt
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

---------
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Updated TE/JAX docs
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding TE/JAX docs' rst files
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Set DType as pybind11::module_local() to avoid generic_type errors.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Updating license and exporting more modules
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adopting autoapi and removing enum_tools.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix typo
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Make jax.rst be style consistent.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fixing doc statements as the suggestion from review.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fixing doc statements as the suggestion from code review.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Update the description of Softmax
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Removed categories in catalog as PyTorch
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>

* add transformer module , unittests and examples
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update tests/jax/test_sharding.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* Update transformer_engine/jax/transformer.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* remove pylint: disable=line-too-long
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* remove pylint: disable=too-many-func-args
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Fix the wrong broadcasting dim to dropout masks when enable transpose_bs.
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Enable 2xACC for WGRAD and DGRAD by default
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* rename LayerNormMlpBlock as LayerNormMLP
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor to avoid line-too-long
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* rename amax_history_size to amax_history_len
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* align dropout mask to TE/PyTorch as default
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* enlarge atol for decoder unittests

Two decoder unittests can pass in old JAX container(e.g., 23.02)
but can't in latest container (devel).

1. The actual(-0.020264) and desired(-0.020386) are very close.
2. The TE kernels are not changed, the diff should come from
   new codegen behavior of XLA.

Thus, it is a common floating-point accumulated error.
Enlarge atol to avoid unittest failures.
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Adding Amax History Support

1. hide amax update in custom_vjp
2. replace amax indexing with roll(using circular buffer)
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* move kernel_init to __post_init__
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* refactor encoder examples
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* Update transformer_engine/jax/fp8.py
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* Update transformer_engine/jax/fp8.py
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>

* remove envvar regarding 2xACC
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

* remove unused import
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>

---------
Signed-off-by: Ryan Jeng <rjeng@nvidia.com>
Signed-off-by: Jeng Bai-Cheng <jeng1220@users.noreply.github.com>
Co-authored-by: Tim Moon <4406448+timmoon10@users.noreply.github.com>
Co-authored-by: Ming-Xu Huang <mingh@nvidia.com>
Co-authored-by: Kirthi Shankar Sivamani <ksivamani@nvidia.com>