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* added XLA FFI custom op for TE/common nvte_cublas_gemm
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started GemmPrimitive, abstract done
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* FP8 tests passing on Blackwell but MXFP8 outputs NaN
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* MXFP8 issue traced to scale factor padding with NaNs instead of zeros
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* fixed GemmPrimitive custom partitioning to match jax.nn.scaled_matmul
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all unit tests passing on H100x8 node
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linting fixes
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fixed batch dimension numbers
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fixed FP8 scale sharding rule when there are no FP8 scales
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added error message for unsupported Shardy partitioner
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* moved reshape of encoder output in encoder examples to make custom partitioning rules work correctly
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* added helper functions for padding and unpadding block scales, changed GemmPrimitive to accept unpadded scales and pad them after sharding
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* reverting modification to force_1x_quantization decision
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* Add support for Fused Attn MLA head_dim_qk != head_dim_v
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* add support for head dim > 128
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* [JAX] Update flax module param initialization to support logical partitioning axes
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* Revised following Reese Wang's comments

Still need further debugging:
FAILED test_fused_attn.py::TestFusedAttn::test_backward[NO_SWA-DROP_0.0-4-128-256-16-16-64-BF16-CROSS-KV_PACKED-NO_MASK-NO_BIAS] - AssertionError:
FAILED test_fused_attn.py::TestFusedAttn::test_backward[NO_SWA-DROP_0.0-4-128-256-16-16-64-BF16-CROSS-KV_PACKED-NO_MASK-POST_SCALE_BIAS-1HSS] - AssertionError:
FAILED test_fused_attn.py::TestFusedAttn::test_backward[NO_SWA-DROP_0.0-4-128-256-16-16-64-BF16-CROSS-SEPARATE-NO_MASK-NO_BIAS] - AssertionError:
FAILED test_fused_attn.py::TestFusedAttn::test_backward[NO_SWA-DROP_0.0-4-128-256-16-16-64-BF16-CROSS-SEPARATE-NO_MASK-POST_SCALE_BIAS-1HSS] - AssertionError:

These errors does not exist in the previous commit
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---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Co-authored-by: Phuong Nguyen <36155692+phu0ngng@users.noreply.github.com>

* renamed gelu to act

* added relu, srelu, qgelu

* fixes initialization for layernorm_fp8_mlp tests

* moved activation_fp8 prim into testunit file

* Moved NVTE_Activation_Enum to common/.../activation.h

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* templated primitives and respective C++ functions
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixes for LayerNormMLP, tests in test_custom_compute all passed
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* added default arg for pybind get_workspace_size funcs
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixes for TestTransFormer with non-gated act tests
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* renamed gelu to act
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* improved enum implementation, avoid using magic numbers
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Exposed C++ ActivationEnum to python side
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Changed error messages
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* changed conditional check on input shape for dbias_cast_transpose
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* changed dtype (tol) for bias grad tests
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixes so that layer_norm_fp8_mlp can take bias = None
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Set bias = None in flax modules
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Add layernorm_fp8_dot unit test
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Update the softmax primitives support conditions
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add tests for the softmax primitives
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Round1 refactor of test_layer
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Split dropout arguments of ref code and add hidden/intermediate dropout elementwise comparison
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add dropout_braodcast_dim, self_attn_mask tests and clean a few code
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Abstract test layer and fix a rope reference code diff
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add bias tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add epsilon and float32 tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add relpos_bias and attention dropout tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Loose the atol
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Move common fixtures to conftest.py
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add doc string for test_layer
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add doc string for test_layer
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix conflicts of test_layer
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Avoid to left bias parameters in graph when use_bias=False
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Implemented swiglu and silu
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* Renamed nvte-*silu to nvte-*swish + generalized GetDBiasDact functions
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* combined layernorm_geglu with layernorm_gelu into fused_layernorm
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* fixes to pass all unit tests in test_custom_call_compute.py,
test_layer.py, and test_praxis_layer.py
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* cleaning and formatting
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* renaming based on reviewers suggestions
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* implemented partial fused layernorm
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* geglu + bias passed tests
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* added partial fused calculation for dbias_1
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>

* clean up
Co-authored-by: Alp Dener <adener@nvidia.com>
Signed-off-by: Phuong Nguyen <36155692+phu0ngng@users.noreply.github.com>

---------
Signed-off-by: Phuong Nguyen <phuonguyen@nvidia.com>
Signed-off-by: Phuong Nguyen <36155692+phu0ngng@users.noreply.github.com>
Co-authored-by: Alp Dener <adener@nvidia.com>

* Remove unused headers
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Unify the fused attn workspace size cpp code
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Reduce the skipped cases
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Rename self/cross attention to qkvpacked/kvpacked
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Update attention mask docs
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refine the attn mask implementations
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>

Support various implementations of RoPE and fix a coordinate representation bug
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Refine MHA API
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Reuse func from the flax
Signed-off-by: Reese Wang <rewang@nvidia.com>

* DPA draft
Signed-off-by: Reese Wang <rewang@nvidia.com>

* qkv packed draft
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix test_layer with fused attn
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add attn_bias_type and enhance a few code flow
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Move scale_factor from __call__ to init
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Enhance the docs
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add DPA public API and tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refine docs
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refine docs
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix conflict
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add qkv separate fused attn
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Apply BSHD_BSHD_BSHD format
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove debug log
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add fused attention layer tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add NVTE_FUSED_ATTN docs
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fine-grained fused attn settings
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove the default value of num_attetnion_head and head_dim
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add teardown for fused attn env
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Unify the Optional notation
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix Pre/Post scale bias comments
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add no_mask tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add checkpoint_name for fused attn
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix the fused attn batcher
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Adding support of sequence parallelism
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding RoPE
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix wrong batch_logical_axes
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Rnaming FSDP outer env var
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Poring RoPE to Praxis layers.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Porting GeLU + [FP8 Cast].
Signed-off-by: Ming Huang <mingh@nvidia.com>

* WAR to make XLA successfully match FP8 GEMM on FFN1 with GeLU.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Allowing arbitrary dimension of NVShape for the workspace allocation
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Adding checkpoint_name to fused functions of mlp.py to get better perf with nn.scan.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Modify with review feedback.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix bugs
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix typo.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fixed for lint
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Follow review feedback to modify code.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Fix typo.
Signed-off-by: Ming Huang <mingh@nvidia.com>

* Port SP to Praxis
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fix an issue when enabling both GQA and RoPE.
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Update docs
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

---------
Signed-off-by: Ming Huang <mingh@nvidia.com>
Signed-off-by: Ming-Xu Huang <mingh@nvidia.com>

* Fix unfused GQA perf
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Remove WAR for Check failed: reduction_kind.has_value()
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Removed cudaMalloc/WorkspaceManager in JAX csrc. JAX custom ops now request buffers from XLA for their workspace tensors.
Signed-off-by: Alp Dener <adener@nvidia.com>

* removed unused GEMM C++ API in TE-JAX
Signed-off-by: Alp Dener <adener@nvidia.com>

* fixed typo in layernorm_geglu_fp8_mlp and removed unnecessary shape reductions in primitives
Signed-off-by: Alp Dener <adener@nvidia.com>

* fixed import order for linting
Signed-off-by: Alp Dener <adener@nvidia.com>

* fixed custom op errors due to incorrect static arg nums in JAX jit
Signed-off-by: Alp Dener <adener@nvidia.com>

* shifted cudnnSetStream further down the kernel to avoid error when executing dummy kernel call with nullptr stream
Signed-off-by: Alp Dener <adener@nvidia.com>

* fixed linting errors for blank lines
Signed-off-by: Alp Dener <adener@nvidia.com>

---------
Signed-off-by: Alp Dener <adener@nvidia.com>

* Support num_gqa_groups arguments
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add GQA support on the JAX bridge code
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Fix the kv stride of the arbitrary backend
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Complete rewrite fused attention tests and add GQA coverage
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Support unfused GQA
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Calculate seqlen before the primitive for the better perf
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add GQA layer tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Apply code style checks for te_jax
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Apply code style checks for tests
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add num_gqa_groups doc
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Refine the qkv_type
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Correct the variable naming
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Handle Max512 CAUSAL
Signed-off-by: Reese Wang <rewang@nvidia.com>

* Add WAR for the latest jax image
Signed-off-by: Reese Wang <rewang@nvidia.com>

---------
Signed-off-by: Reese Wang <rewang@nvidia.com>