#Copyright 2020 Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany # #Licensed under the Apache License, Version 2.0 (the "License"); #you may not use this file except in compliance with the License. #You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # #Unless required by applicable law or agreed to in writing, software #distributed under the License is distributed on an "AS IS" BASIS, #WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. #See the License for the specific language governing permissions and #limitations under the License. FROM nvidia/cuda:11.1.1-devel-ubuntu20.04 ARG env_det_num_threads=6 ARG env_det_verbose=1 # Setup environment variables ENV TORCH_CUDA_ARCH_LIST=6.1+PTX;7.0+PTX;7.5+PTX FORCE_CUDA=1 ENV det_data=/opt/data det_models=/opt/models det_num_threads=$env_det_num_threads det_verbose=$env_det_verbose OMP_NUM_THREADS=1 # Install some tools RUN apt-get update && export DEBIAN_FRONTEND=noninteractive && apt-get install -y \ git \ cmake \ make \ wget \ gnupg \ build-essential \ software-properties-common \ gdb \ ninja-build # Setup miniconda and create a new python environment with python 3.7 RUN wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh \ && chmod +x miniconda.sh \ && ./miniconda.sh -b -p /opt/miniconda \ && rm ./miniconda.sh \ && ln -s /opt/miniconda/bin/activate /activate \ && . /activate \ && pip install numpy \ && pip install torch==1.8.1+cu111 torchvision==0.9.1+cu111 torchaudio==0.8.1 -f https://download.pytorch.org/whl/torch_stable.html # Install own code COPY ./requirements.txt . RUN mkdir ${det_data} \ && mkdir ${det_models} \ && mkdir -p /opt/code/nndet \ && . /activate \ && pip install -r requirements.txt \ && pip install hydra-core --upgrade --pre \ && pip install git+https://github.com/mibaumgartner/pytorch_model_summary.git WORKDIR /opt/code/nndet COPY . . RUN echo ". /activate" >> ~/.bashrc RUN . /activate && pip install -v -e .