/* -------------------------------------------------------------------------- * * OpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2010 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "openmm/serialization/XmlSerializer.h" #include "tinyxml.h" using namespace OpenMM; using namespace std; void XmlSerializer::serialize(const SerializationNode& node, std::ostream& stream) { TiXmlDocument doc; TiXmlDeclaration* decl = new TiXmlDeclaration( "1.0", "", "" ); doc.LinkEndChild(decl); doc.LinkEndChild(encodeNode(node)); TiXmlPrinter printer; printer.SetIndent("\t"); doc.Accept(&printer); stream << printer.Str(); } TiXmlElement* XmlSerializer::encodeNode(const SerializationNode& node) { TiXmlElement* element = new TiXmlElement(node.getName()); const map& properties = node.getProperties(); for (map::const_iterator iter = properties.begin(); iter != properties.end(); ++iter) element->SetAttribute(iter->first.c_str(), iter->second.c_str()); const vector& children = node.getChildren(); for (int i = 0; i < (int) children.size(); i++) element->LinkEndChild(encodeNode(children[i])); return element; } void* XmlSerializer::deserializeStream(std::istream& stream) { TiXmlDocument doc; stream >> doc; SerializationNode root; decodeNode(root, *doc.FirstChildElement()); const SerializationProxy& proxy = SerializationProxy::getProxy(root.getStringProperty("type")); return proxy.deserialize(root); } void XmlSerializer::decodeNode(SerializationNode& node, const TiXmlElement& element) { for (const TiXmlAttribute* attribute = element.FirstAttribute(); attribute != NULL; attribute = attribute->Next()) node.setStringProperty(attribute->NameTStr(), attribute->ValueStr()); for (const TiXmlElement* child = element.FirstChildElement(); child != NULL; child = child->NextSiblingElement()) { SerializationNode& childNode = node.createChildNode(child->ValueTStr()); decodeNode(childNode, *child); } }