/* -------------------------------------------------------------------------- * * OpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "ReferenceFloatStreamImpl.h" using namespace OpenMM; ReferenceFloatStreamImpl::ReferenceFloatStreamImpl(std::string name, int size, Stream::DataType type, const Platform& platform) : StreamImpl(name, size, type, platform) { switch (type) { case Stream::Float: case Stream::Float2: case Stream::Float3: case Stream::Float4: baseType = Stream::Float; break; case Stream::Double: case Stream::Double2: case Stream::Double3: case Stream::Double4: baseType = Stream::Double; break; } switch (type) { case Stream::Float: case Stream::Double: width = 1; break; case Stream::Float2: case Stream::Double2: width = 2; break; case Stream::Float3: case Stream::Double3: width = 3; break; case Stream::Float4: case Stream::Double4: width = 4; break; } data = new RealOpenMM*[size]; for (int i = 0; i < size; ++i) data[i] = new RealOpenMM[width]; } ReferenceFloatStreamImpl::~ReferenceFloatStreamImpl() { delete [] data; } void ReferenceFloatStreamImpl::loadFromArray(const void* array) { if (baseType == Stream::Float) { float* arrayData = (float*) array; for (int i = 0; i < getSize(); ++i) for (int j = 0; j < width; ++j) data[i][j] = arrayData[i*width+j]; } else { double* arrayData = (double*) array; for (int i = 0; i < getSize(); ++i) for (int j = 0; j < width; ++j) data[i][j] = arrayData[i*width+j]; } } void ReferenceFloatStreamImpl::saveToArray(void* array) { if (baseType == Stream::Float) { float* arrayData = (float*) array; for (int i = 0; i < getSize(); ++i) for (int j = 0; j < width; ++j) arrayData[i*width+j] = data[i][j]; } else { double* arrayData = (double*) array; for (int i = 0; i < getSize(); ++i) for (int j = 0; j < width; ++j) arrayData[i*width+j] = data[i][j]; } } void ReferenceFloatStreamImpl::fillWithValue(void* value) { if (baseType == Stream::Float) { float valueData = *((float*) value); for (int i = 0; i < getSize(); ++i) for (int j = 0; j < width; ++j) data[i][j] = valueData; } else { double valueData = *((double*) value); for (int i = 0; i < getSize(); ++i) for (int j = 0; j < width; ++j) data[i][j] = valueData; } } const RealOpenMM* const * ReferenceFloatStreamImpl::getData() const { return data; } RealOpenMM** ReferenceFloatStreamImpl::getData() { return data; }