/* -------------------------------------------------------------------------- * * OpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008-2009 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ /** * This tests the OpenCL implementation of PeriodicTorsionForce. */ #include "../../../tests/AssertionUtilities.h" #include "openmm/Context.h" #include "OpenCLPlatform.h" #include "openmm/PeriodicTorsionForce.h" #include "openmm/System.h" #include "openmm/VerletIntegrator.h" #include "../src/SimTKUtilities/SimTKOpenMMRealType.h" #include #include using namespace OpenMM; using namespace std; const double TOL = 1e-5; void testPeriodicTorsions() { OpenCLPlatform platform; System system; system.addParticle(1.0); system.addParticle(1.0); system.addParticle(1.0); system.addParticle(1.0); VerletIntegrator integrator(0.01); PeriodicTorsionForce* forceField = new PeriodicTorsionForce(); forceField->addTorsion(0, 1, 2, 3, 2, PI_M/3, 1.1); system.addForce(forceField); Context context(system, integrator, platform); vector positions(4); positions[0] = Vec3(0, 1, 0); positions[1] = Vec3(0, 0, 0); positions[2] = Vec3(1, 0, 0); positions[3] = Vec3(1, 0, 2); context.setPositions(positions); State state = context.getState(State::Forces | State::Energy); const vector& forces = state.getForces(); double torque = -2*1.1*std::sin(2*PI_M/3); ASSERT_EQUAL_VEC(Vec3(0, 0, torque), forces[0], TOL); ASSERT_EQUAL_VEC(Vec3(0, 0.5*torque, 0), forces[3], TOL); ASSERT_EQUAL_VEC(Vec3(forces[0][0]+forces[1][0]+forces[2][0]+forces[3][0], forces[0][1]+forces[1][1]+forces[2][1]+forces[3][1], forces[0][2]+forces[1][2]+forces[2][2]+forces[3][2]), Vec3(0, 0, 0), TOL); ASSERT_EQUAL_TOL(1.1*(1+std::cos(2*PI_M/3)), state.getPotentialEnergy(), TOL); } void testParallelComputation() { OpenCLPlatform platform; System system; const int numParticles = 200; for (int i = 0; i < numParticles; i++) system.addParticle(1.0); PeriodicTorsionForce* force = new PeriodicTorsionForce(); for (int i = 3; i < numParticles; i++) force->addTorsion(i-3, i-2, i-1, i, 2, 1.1, i); system.addForce(force); vector positions(numParticles); for (int i = 0; i < numParticles; i++) positions[i] = Vec3(i, i%2, i%3); VerletIntegrator integrator1(0.01); map props1; props1[OpenCLPlatform::OpenCLDeviceIndex()] = "0"; Context context1(system, integrator1, platform, props1); context1.setPositions(positions); State state1 = context1.getState(State::Forces | State::Energy); VerletIntegrator integrator2(0.01); map props2; props2[OpenCLPlatform::OpenCLDeviceIndex()] = "0,0"; Context context2(system, integrator2, platform, props2); context2.setPositions(positions); State state2 = context2.getState(State::Forces | State::Energy); ASSERT_EQUAL_TOL(state1.getPotentialEnergy(), state2.getPotentialEnergy(), 1e-5); for (int i = 0; i < numParticles; i++) ASSERT_EQUAL_VEC(state1.getForces()[i], state2.getForces()[i], 1e-5); } int main() { try { testPeriodicTorsions(); testParallelComputation(); } catch(const exception& e) { cout << "exception: " << e.what() << endl; return 1; } cout << "Done" << endl; return 0; }