/* -------------------------------------------------------------------------- * * AmoebaOpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008-2009 Stanford University and the Authors. * * Authors: * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "openmm/Force.h" #include "openmm/OpenMMException.h" #include "AmoebaWcaDispersionForce.h" #include "internal/AmoebaWcaDispersionForceImpl.h" #include using namespace OpenMM; AmoebaWcaDispersionForce::AmoebaWcaDispersionForce() { epso = 0.1100; epsh = 0.0135; rmino = 1.7025; rminh = 1.3275; awater = 0.033428; slevy = 1.0; shctd = 0.81; dispoff = 0.26; } int AmoebaWcaDispersionForce::addParticle( double radius, double epsilon ) { parameters.push_back(WcaDispersionInfo( radius, epsilon)); return parameters.size()-1; } void AmoebaWcaDispersionForce::getParticleParameters(int particleIndex, double& radius, double& epsilon ) const { radius = parameters[particleIndex].radius; epsilon = parameters[particleIndex].epsilon; } void AmoebaWcaDispersionForce::setParticleParameters(int particleIndex, double radius, double epsilon ) { parameters[particleIndex].radius = radius; parameters[particleIndex].epsilon = epsilon; } double AmoebaWcaDispersionForce::getEpso( void ) const { return epso; } double AmoebaWcaDispersionForce::getEpsh( void ) const { return epsh; } double AmoebaWcaDispersionForce::getRmino( void ) const { return rmino; } double AmoebaWcaDispersionForce::getRminh( void ) const { return rminh; } double AmoebaWcaDispersionForce::getAwater( void ) const { return awater; } double AmoebaWcaDispersionForce::getShctd( void ) const { return shctd; } double AmoebaWcaDispersionForce::getDispoff( void ) const { return dispoff; } double AmoebaWcaDispersionForce::getSlevy( void ) const { return slevy; } void AmoebaWcaDispersionForce::setEpso( double inputEpso ){ epso = inputEpso; } void AmoebaWcaDispersionForce::setEpsh( double inputEpsh ){ epsh = inputEpsh; } void AmoebaWcaDispersionForce::setRmino( double inputRmino ){ rmino = inputRmino; } void AmoebaWcaDispersionForce::setRminh( double inputRminh ){ rminh = inputRminh; } void AmoebaWcaDispersionForce::setAwater( double inputAwater ){ awater = inputAwater; } void AmoebaWcaDispersionForce::setShctd( double inputShctd ){ shctd = inputShctd; } void AmoebaWcaDispersionForce::setDispoff( double inputDispoff ){ dispoff = inputDispoff; } void AmoebaWcaDispersionForce::setSlevy( double inputSlevy ){ slevy = inputSlevy; } ForceImpl* AmoebaWcaDispersionForce::createImpl() { return new AmoebaWcaDispersionForceImpl(*this); }