#ifndef OPENMM_AMOEBA_WCA_DISPERSION_FORCE_H_ #define OPENMM_AMOEBA_WCA_DISPERSION_FORCE_H_ /* -------------------------------------------------------------------------- * * AmoebaOpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008-2009 Stanford University and the Authors. * * Authors: * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "openmm/Force.h" #include #include "openmm/internal/windowsExport.h" namespace OpenMM { /** * This class implements an interaction between pairs of particles that varies harmonically with the distance * between them. To use it, create a WcaDispersionForce object then call addAngle() once for each angle. After * a angle has been added, you can modify its force field parameters by calling setAngleParameters(). */ class OPENMM_EXPORT AmoebaWcaDispersionForce : public Force { public: /** * Create a Amoeba WcaDispersionForce. */ AmoebaWcaDispersionForce(); /** * Get the number of particles */ int getNumParticles() const { return parameters.size(); } /** * Set the force field parameters for a wca dispersion particle. * * @param particleIndex the particle index * @param radius radius * @param epsilon epsilon */ void setParticleParameters(int particleIndex, double radius, double epsilon ); /** * Get the force field parameters for a wca dispersion particle. * * @param particleIndex the particle index * @param radius radius * @param epsilon epsilon */ void getParticleParameters(int particleIndex, double& radius, double& epsilon) const; /** * Set the force field parameters for a wca dispersion particle. * * @param radius radius * @param epsilon epsilon * @return index of added particle */ int addParticle( double radius, double epsilon ); /* * Constants */ double getEpso( void ) const; double getEpsh( void ) const; double getRmino( void ) const; double getRminh( void ) const; double getAwater( void ) const; double getShctd( void ) const; double getDispoff( void ) const; double getSlevy( void ) const; void setEpso( double inputValue ); void setEpsh( double inputValue ); void setRmino( double inputValue ); void setRminh( double inputValue ); void setAwater( double inputValue ); void setShctd( double inputValue ); void setDispoff( double inputValue ); void setSlevy( double inputValue ); protected: ForceImpl* createImpl(); private: class WcaDispersionInfo; double epso; double epsh; double rmino; double rminh; double awater; double slevy; double shctd; double dispoff; // Retarded visual studio compiler complains about being unable to // export private stl class members. // This stanza explains that it should temporarily shut up. #if defined(_MSC_VER) #pragma warning(push) #pragma warning(disable:4251) #endif std::vector parameters; #if defined(_MSC_VER) #pragma warning(pop) #endif }; class AmoebaWcaDispersionForce::WcaDispersionInfo { public: double radius, epsilon; WcaDispersionInfo() { radius = 1.0; epsilon = 0.0; } WcaDispersionInfo( double radius, double epsilon ) : radius(radius), epsilon(epsilon) { } }; } // namespace OpenMM #endif /*OPENMM_AMOEBA_WCA_DISPERSION_FORCE_H_*/