/* -------------------------------------------------------------------------- * * OpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2016 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #ifdef WIN32 #define _USE_MATH_DEFINES // Needed to get M_PI #endif #include "openmm/internal/AssertionUtilities.h" #include "openmm/Context.h" #include "openmm/GayBerneForce.h" #include "openmm/NonbondedForce.h" #include "openmm/System.h" #include "openmm/VerletIntegrator.h" #include "sfmt/SFMT.h" #include #include using namespace OpenMM; using namespace std; const double TOL = 1e-5; void testPointParticles() { // For point particles, it should be identical to a standard Lennard-Jones force. const int numParticles = 10; const double sigma = 0.5; const double epsilon = 1.5; System system; GayBerneForce* gb = new GayBerneForce(); NonbondedForce* nb = new NonbondedForce(); system.addForce(gb); system.addForce(nb); gb->setForceGroup(1); vector positions; OpenMM_SFMT::SFMT sfmt; init_gen_rand(0, sfmt); for (int i = 0; i < numParticles; i++) { system.addParticle(1.0); gb->addParticle(sigma, epsilon, -1, -1, sigma/2, sigma/2, sigma/2, 1, 1, 1); nb->addParticle(0, sigma, epsilon); positions.push_back(Vec3(2.0*genrand_real2(sfmt), 2.0*genrand_real2(sfmt), 2.0*genrand_real2(sfmt))); } VerletIntegrator integ(0.001); // Compute forces and energy with each one and compare them. Context context(system, integ, platform); context.setPositions(positions); State state1 = context.getState(State::Forces | State::Energy, false, 1); State state2 = context.getState(State::Forces | State::Energy, false, 2); ASSERT_EQUAL_TOL(state1.getPotentialEnergy(), state2.getPotentialEnergy(), 1e-5); } void runPlatformTests(); int main(int argc, char* argv[]) { try { initializeTests(argc, argv); testPointParticles(); runPlatformTests(); } catch(const exception& e) { cout << "exception: " << e.what() << endl; return 1; } cout << "Done" << endl; return 0; }