/* -------------------------------------------------------------------------- * * OpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008 Stanford University and the Authors. * * Authors: Peter Eastman, Mark Friedrichs, Chris Bruns * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ void kshakeh_fix1 (const float nit, const float strwidth, const float invmH, ::brook::stream atoms, ::brook::stream posq, ::brook::stream posqp, ::brook::stream params, ::brook::stream cposq0, ::brook::stream cposq1, ::brook::stream cposq2, ::brook::stream cposq3); void kshakeh_update1_fix1 ( const float strwidth, const float sdpc1, ::brook::stream invmap, ::brook::stream posq, ::brook::stream posqp, ::brook::stream vPrime, ::brook::stream cposq0, ::brook::stream cposq1, ::brook::stream cposq2, ::brook::stream cposq3, ::brook::stream oposq); void kshakeh_update2_fix1 (const float strwidth, ::brook::stream invmap, ::brook::stream posq, ::brook::stream posqp, ::brook::stream cposq0, ::brook::stream cposq1, ::brook::stream cposq2, ::brook::stream cposq3, ::brook::stream oposq);