/* Portions copyright (c) 2006-2016 Stanford University and Simbios. * Contributors: Pande Group * * Permission is hereby granted, free of charge, to any person obtaining * a copy of this software and associated documentation files (the * "Software"), to deal in the Software without restriction, including * without limitation the rights to use, copy, modify, merge, publish, * distribute, sublicense, and/or sell copies of the Software, and to * permit persons to whom the Software is furnished to do so, subject * to the following conditions: * * The above copyright notice and this permission notice shall be included * in all copies or substantial portions of the Software. * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS * OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF * MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. * IN NO EVENT SHALL THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE * LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION * OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION * WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. */ #ifndef __ReferenceLJCoulomb14_H__ #define __ReferenceLJCoulomb14_H__ #include "ReferenceBondIxn.h" #include "openmm/internal/windowsExport.h" namespace OpenMM { class OPENMM_EXPORT ReferenceLJCoulomb14 : public ReferenceBondIxn { public: /**--------------------------------------------------------------------------------------- Constructor --------------------------------------------------------------------------------------- */ ReferenceLJCoulomb14(); /**--------------------------------------------------------------------------------------- Destructor --------------------------------------------------------------------------------------- */ ~ReferenceLJCoulomb14(); /**--------------------------------------------------------------------------------------- Set the force to use periodic boundary conditions. @param vectors the vectors defining the periodic box --------------------------------------------------------------------------------------- */ void setPeriodic(OpenMM::Vec3* vectors); /**--------------------------------------------------------------------------------------- Calculate nonbonded 1-4 interactinos @param atomIndices atom indices of the atoms in each pair @param atomCoordinates atom coordinates @param parameters (sigma, 4*epsilon, charge product) for each pair @param forces force array (forces added to current values) @param totalEnergy if not null, the energy will be added to this --------------------------------------------------------------------------------------- */ void calculateBondIxn(std::vector& atomIndices, std::vector& atomCoordinates, std::vector& parameters, std::vector& forces, double* totalEnergy, double* energyParamDerivs); private: bool periodic; OpenMM::Vec3 periodicBoxVectors[3]; }; } // namespace OpenMM #endif // __ReferenceLJCoulomb14_H__