language: cpp compiler: - clang before_install: - sudo apt-get update -qq - sudo apt-get install -qq libpcre3 libpcre3-dev gromacs - sudo apt-get install -qq swig doxygen llvm-3.3 - sudo apt-get install -qq python-numpy python-scipy python-pip - sudo pip install nose - export ASAN_SYMBOLIZER_PATH=/usr/bin/llvm-symbolizer-3.3 script: - cmake -DCMAKE_INSTALL_PREFIX=$HOME/OpenMM . - make -j2 - make -j2 install - sudo make PythonInstall - # run all of the tests - ctest -j2 -V - # get a list of all of the failed tests into this stupid ctest format - python -c 'fn = "Testing/Temporary/LastTestsFailed.log"; import os; os.path.exists(fn) or exit(0); l = [line.split(":")[0] for line in open(fn)]; triplets = zip(l, l, [","]*len(l)); print "".join(",".join(t) for t in triplets)' > FailedTests.log - # rerun all of the failed tests - if [ -s FailedTests.log ]; then ctest -V -I FailedTests.log; fi; - # run the python tests too - cd python/tests - nosetests -vv --processes=-1 --process-timeout=200