#ifndef AMOEBA_OPENMM_OPENCLKERNELS_H #define AMOEBA_OPENMM_OPENCLKERNELS_H /* -------------------------------------------------------------------------- * * OpenMMAmoeba * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008-2021 Stanford University and the Authors. * * Authors: Mark Friedrichs, Peter Eastman * * Contributors: * * * * This program is free software: you can redistribute it and/or modify * * it under the terms of the GNU Lesser General Public License as published * * by the Free Software Foundation, either version 3 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU Lesser General Public License for more details. * * * * You should have received a copy of the GNU Lesser General Public License * * along with this program. If not, see . * * -------------------------------------------------------------------------- */ #include "openmm/amoebaKernels.h" #include "openmm/kernels.h" #include "openmm/System.h" #include "AmoebaCommonKernels.h" #include "OpenCLContext.h" #include "OpenCLFFT3D.h" #include "OpenCLSort.h" namespace OpenMM { /** * This kernel is invoked by AmoebaMultipoleForce to calculate the forces acting on the system and the energy of the system. */ class OpenCLCalcAmoebaMultipoleForceKernel : public CommonCalcAmoebaMultipoleForceKernel { public: OpenCLCalcAmoebaMultipoleForceKernel(const std::string& name, const Platform& platform, OpenCLContext& cl, const System& system) : CommonCalcAmoebaMultipoleForceKernel(name, platform, cl, system), fft(NULL) { } ~OpenCLCalcAmoebaMultipoleForceKernel(); /** * Initialize the kernel. * * @param system the System this kernel will be applied to * @param force the AmoebaMultipoleForce this kernel will be used for */ void initialize(const System& system, const AmoebaMultipoleForce& force); /** * Compute the FFT. */ void computeFFT(bool forward); /** * Get whether charge spreading should be done in fixed point. */ bool useFixedPointChargeSpreading() const { return true; } private: OpenCLFFT3D* fft; }; /** * This kernel is invoked by HippoNonbondedForce to calculate the forces acting on the system and the energy of the system. */ class OpenCLCalcHippoNonbondedForceKernel : public CommonCalcHippoNonbondedForceKernel { public: OpenCLCalcHippoNonbondedForceKernel(const std::string& name, const Platform& platform, OpenCLContext& cl, const System& system) : CommonCalcHippoNonbondedForceKernel(name, platform, cl, system), sort(NULL), hasInitializedFFT(false) { } ~OpenCLCalcHippoNonbondedForceKernel(); /** * Initialize the kernel. * * @param system the System this kernel will be applied to * @param force the HippoNonbondedForce this kernel will be used for */ void initialize(const System& system, const HippoNonbondedForce& force); /** * Compute the FFT. */ void computeFFT(bool forward, bool dispersion); /** * Get whether charge spreading should be done in fixed point. */ bool useFixedPointChargeSpreading() const { return true; } /** * Sort the atom grid indices. */ void sortGridIndex(); private: class SortTrait : public OpenCLSort::SortTrait { int getDataSize() const {return 8;} int getKeySize() const {return 4;} const char* getDataType() const {return "int2";} const char* getKeyType() const {return "int";} const char* getMinKey() const {return "(-2147483647-1)";} const char* getMaxKey() const {return "2147483647";} const char* getMaxValue() const {return "make_int2(2147483647, 2147483647)";} const char* getSortKey() const {return "value.y";} }; bool hasInitializedFFT; OpenCLSort* sort; OpenCLFFT3D *fftForward, *fftBackward, *dfftForward, *dfftBackward; }; } // namespace OpenMM #endif /*AMOEBA_OPENMM_OPENCLKERNELS_H*/