#ifndef OPENMM_INTEGRATOR_H_ #define OPENMM_INTEGRATOR_H_ /* -------------------------------------------------------------------------- * * OpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "Vec3.h" #include #include namespace OpenMM { class OpenMMContext; /** * An Integrator defines a method for simulating a System by integrating the equations of motion. * This is an abstract class. Subclasses define particular integration methods. * * Each Integrator object is bound to a particular OpenMMContext which it integrates. This connection * is specified by passing the Integrator as an argument to the constructor of the OpenMMContext. */ class Integrator { public: virtual ~Integrator() { } /** * Get the size of each time step, in picoseconds. */ double getStepSize() const { return stepSize; } /** * Set the size of each time step, in picoseconds. */ void setStepSize(double size) { stepSize = size; } /** * Advance a simulation through time by taking a series of time steps. * * @param steps the number of time steps to take */ virtual void step(int steps) = 0; protected: friend class OpenMMContextImpl; /** * This will be called by the OpenMMContext when it is created. It informs the Integrator * of what context it will be integrating, and gives it a chance to do any necessary initialization. * It will also get called again if the application calls reinitialize() on the OpenMMContext. */ virtual void initialize(OpenMMContextImpl& context) = 0; /** * Get the names of all Kernels used by this Integrator. */ virtual std::vector getKernelNames() = 0; private: double stepSize; }; } // namespace OpenMM #endif /*OPENMM_INTEGRATOR_H_*/