/* -------------------------------------------------------------------------- * * OpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2011 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * This program is free software: you can redistribute it and/or modify * * it under the terms of the GNU Lesser General Public License as published * * by the Free Software Foundation, either version 3 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU Lesser General Public License for more details. * * * * You should have received a copy of the GNU Lesser General Public License * * along with this program. If not, see . * * -------------------------------------------------------------------------- */ #include "OpenCLParallelKernels.h" using namespace OpenMM; using namespace std; OpenCLParallelCalcForcesAndEnergyKernel::OpenCLParallelCalcForcesAndEnergyKernel(string name, const Platform& platform, OpenCLPlatform::PlatformData& data) : CalcForcesAndEnergyKernel(name, platform), data(data) { for (int i = 0; i < (int) data.contexts.size(); i++) kernels.push_back(Kernel(new OpenCLCalcForcesAndEnergyKernel(name, platform, *data.contexts[i]))); } void OpenCLParallelCalcForcesAndEnergyKernel::initialize(const System& system) { for (int i = 0; i < (int) kernels.size(); i++) getKernel(i).initialize(system); } void OpenCLParallelCalcForcesAndEnergyKernel::beginComputation(ContextImpl& context, bool includeForce, bool includeEnergy) { // Copy coordinates over to each device. OpenCLContext& mainContext = *data.contexts[0]; mainContext.getPosq().download(); for (int i = 1; i < (int) data.contexts.size(); i++) data.contexts[i]->getPosq().upload(mainContext.getPosq().getHostBuffer()); // Execute the kernel on each device. for (int i = 0; i < (int) kernels.size(); i++) getKernel(i).beginComputation(context, includeForce, includeEnergy); } double OpenCLParallelCalcForcesAndEnergyKernel::finishComputation(ContextImpl& context, bool includeForce, bool includeEnergy) { double energy = 0.0; for (int i = 0; i < (int) kernels.size(); i++) energy += getKernel(i).finishComputation(context, includeForce, includeEnergy); if (includeForce) { // Sum the forces from all devices. for (int i = 0; i < (int) data.contexts.size(); i++) data.contexts[i]->getForce().download(); OpenCLArray& forces = data.contexts[0]->getForce(); for (int i = 1; i < (int) data.contexts.size(); i++) { OpenCLArray& contextForces = data.contexts[i]->getForce(); for (int j = 0; j < forces.getSize(); j++) { mm_float4& f1 = forces[j]; const mm_float4& f2 = contextForces[j]; f1.x += f2.x; f1.y += f2.y; f1.z += f2.z; } } forces.upload(); } return energy; } OpenCLParallelCalcHarmonicBondForceKernel::OpenCLParallelCalcHarmonicBondForceKernel(std::string name, const Platform& platform, OpenCLPlatform::PlatformData& data, System& system) : CalcHarmonicBondForceKernel(name, platform), data(data) { for (int i = 0; i < (int) data.contexts.size(); i++) kernels.push_back(Kernel(new OpenCLCalcHarmonicBondForceKernel(name, platform, *data.contexts[i], system))); } void OpenCLParallelCalcHarmonicBondForceKernel::initialize(const System& system, const HarmonicBondForce& force) { for (int i = 0; i < (int) kernels.size(); i++) getKernel(i).initialize(system, force); } double OpenCLParallelCalcHarmonicBondForceKernel::execute(ContextImpl& context, bool includeForces, bool includeEnergy) { for (int i = 0; i < (int) kernels.size(); i++) getKernel(i).execute(context, includeForces, includeEnergy); }