/* -------------------------------------------------------------------------- *
* OpenMM *
* -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of *
* Biological Structures at Stanford, funded under the NIH Roadmap for *
* Medical Research, grant U54 GM072970. See https://simtk.org. *
* *
* Portions copyright (c) 2009 Stanford University and the Authors. *
* Authors: Scott Le Grand, Peter Eastman *
* Contributors: *
* *
* This program is free software: you can redistribute it and/or modify *
* it under the terms of the GNU Lesser General Public License as published *
* by the Free Software Foundation, either version 3 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU Lesser General Public License for more details. *
* *
* You should have received a copy of the GNU Lesser General Public License *
* along with this program. If not, see . *
* -------------------------------------------------------------------------- */
#include
#include
#include
#include
#include
#include
#include
using namespace std;
#include "gputypes.h"
#include "cudatypes.h"
static __constant__ cudaGmxSimulation cSim;
static __constant__ Expression<256> forceExpX;
static __constant__ Expression<256> forceExpY;
static __constant__ Expression<256> forceExpZ;
static __constant__ Expression<256> energyExp;
#include "kEvaluateExpression.h"
void SetCalculateCustomExternalForcesSim(gpuContext gpu)
{
cudaError_t status;
status = cudaMemcpyToSymbol(cSim, &gpu->sim, sizeof(cudaGmxSimulation));
RTERROR(status, "cudaMemcpyToSymbol: SetSim copy to cSim failed");
}
void GetCalculateCustomExternalForcesSim(gpuContext gpu)
{
cudaError_t status;
status = cudaMemcpyFromSymbol(&gpu->sim, cSim, sizeof(cudaGmxSimulation));
RTERROR(status, "cudaMemcpyFromSymbol: SetSim copy from cSim failed");
}
void SetCustomExternalForceExpressions(const Expression<256>& expressionX, const Expression<256>& expressionY, const Expression<256>& expressionZ)
{
cudaError_t status;
status = cudaMemcpyToSymbol(forceExpX, &expressionX, sizeof(forceExpX));
status = cudaMemcpyToSymbol(forceExpY, &expressionY, sizeof(forceExpY));
status = cudaMemcpyToSymbol(forceExpZ, &expressionZ, sizeof(forceExpZ));
RTERROR(status, "SetCustomExternalForceExpression: cudaMemcpyToSymbol failed");
}
void SetCustomExternalEnergyExpression(const Expression<256>& expression)
{
cudaError_t status;
status = cudaMemcpyToSymbol(energyExp, &expression, sizeof(energyExp));
RTERROR(status, "SetCustomExternalEnergyExpression: cudaMemcpyToSymbol failed");
}
void SetCustomExternalGlobalParams(const vector& paramValues)
{
cudaError_t status;
status = cudaMemcpyToSymbol(globalParams, ¶mValues[0], paramValues.size()*sizeof(float));
RTERROR(status, "SetCustomExternalGlobalParams: cudaMemcpyToSymbol failed");
}
__global__
#if (__CUDA_ARCH__ >= 200)
__launch_bounds__(1024, 1)
#elif (__CUDA_ARCH__ >= 130)
__launch_bounds__(512, 1)
#else
__launch_bounds__(256, 1)
#endif
void kCalculateCustomExternalForces_kernel()
{
extern __shared__ float stack[];
float* variables = (float*) &stack[cSim.customExpressionStackSize*blockDim.x];
unsigned int index = blockIdx.x * blockDim.x + threadIdx.x;
float totalEnergy = 0.0f;
while (index < cSim.customExternals)
{
int atom = cSim.pCustomExternalID[index];
float4 params = cSim.pCustomExternalParams[index];
float4 pos = cSim.pPosq[atom];
VARIABLE(0) = pos.x;
VARIABLE(1) = pos.y;
VARIABLE(2) = pos.z;
VARIABLE(3) = params.x;
VARIABLE(4) = params.y;
VARIABLE(5) = params.z;
VARIABLE(6) = params.w;
totalEnergy += kEvaluateExpression_kernel(&energyExp, stack, variables);;
float4 force = cSim.pForce4[atom];
force.x -= kEvaluateExpression_kernel(&forceExpX, stack, variables);
force.y -= kEvaluateExpression_kernel(&forceExpY, stack, variables);
force.z -= kEvaluateExpression_kernel(&forceExpZ, stack, variables);
cSim.pForce4[atom] = force;
index += blockDim.x * gridDim.x;
}
cSim.pEnergy[blockIdx.x * blockDim.x + threadIdx.x] += totalEnergy;
}
void kCalculateCustomExternalForces(gpuContext gpu)
{
// printf("kCalculateCustomExternalForces\n");
kCalculateCustomExternalForces_kernel<<sim.blocks, gpu->sim.localForces_threads_per_block,
(gpu->sim.customExpressionStackSize+9)*sizeof(float)*gpu->sim.localForces_threads_per_block>>>();
LAUNCHERROR("kCalculateCustomExternalForces");
}