/* -------------------------------------------------------------------------- * * OpenMMAmoeba * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008-2025 Stanford University and the Authors. * * Authors: Peter Eastman, Mark Friedrichs * * Contributors: * * * * This program is free software: you can redistribute it and/or modify * * it under the terms of the GNU Lesser General Public License as published * * by the Free Software Foundation, either version 3 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU Lesser General Public License for more details. * * * * You should have received a copy of the GNU Lesser General Public License * * along with this program. If not, see . * * -------------------------------------------------------------------------- */ #include "AmoebaOpenCLKernels.h" using namespace OpenMM; using namespace std; /* -------------------------------------------------------------------------- * * HippoNonbondedForce * * -------------------------------------------------------------------------- */ void OpenCLCalcHippoNonbondedForceKernel::initialize(const System& system, const HippoNonbondedForce& force) { CommonCalcHippoNonbondedForceKernel::initialize(system, force); if (usePME) { OpenCLContext& cl = dynamic_cast(cc); sort = cl.createSort(new SortTrait(), cc.getNumAtoms()); } } void OpenCLCalcHippoNonbondedForceKernel::sortGridIndex() { sort->sort(dynamic_cast(cc).unwrap(pmeAtomGridIndex)); }