/* -------------------------------------------------------------------------- * * OpenMMAmoeba * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2008-2009 Stanford University and the Authors. * * Authors: * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "openmm/Force.h" #include "openmm/OpenMMException.h" #include "openmm/AmoebaAngleForce.h" #include "openmm/internal/AmoebaAngleForceImpl.h" using namespace OpenMM; AmoebaAngleForce::AmoebaAngleForce() { _globalCubicK = _globalQuarticK = _globalPenticK = _globalSexticK = 0.0; } int AmoebaAngleForce::addAngle(int particle1, int particle2, int particle3, double length, double quadraticK) { angles.push_back(AngleInfo(particle1, particle2, particle3, length, quadraticK)); return angles.size()-1; } void AmoebaAngleForce::getAngleParameters(int index, int& particle1, int& particle2, int& particle3, double& length, double& quadraticK ) const { particle1 = angles[index].particle1; particle2 = angles[index].particle2; particle3 = angles[index].particle3; length = angles[index].length; quadraticK = angles[index].quadraticK; } void AmoebaAngleForce::setAngleParameters(int index, int particle1, int particle2, int particle3, double length, double quadraticK ) { angles[index].particle1 = particle1; angles[index].particle2 = particle2; angles[index].particle3 = particle3; angles[index].length = length; angles[index].quadraticK = quadraticK; } double AmoebaAngleForce::getAmoebaGlobalAngleCubic( void ) const { return _globalCubicK; } void AmoebaAngleForce::setAmoebaGlobalAngleCubic(double cubicK ) { _globalCubicK = cubicK; } double AmoebaAngleForce::getAmoebaGlobalAngleQuartic( void ) const { return _globalQuarticK; } void AmoebaAngleForce::setAmoebaGlobalAngleQuartic(double quarticK ) { _globalQuarticK = quarticK; } double AmoebaAngleForce::getAmoebaGlobalAnglePentic( void ) const { return _globalPenticK; } void AmoebaAngleForce::setAmoebaGlobalAnglePentic(double penticK ) { _globalPenticK = penticK; } double AmoebaAngleForce::getAmoebaGlobalAngleSextic( void ) const { return _globalSexticK; } void AmoebaAngleForce::setAmoebaGlobalAngleSextic(double sexticK ) { _globalSexticK = sexticK; } ForceImpl* AmoebaAngleForce::createImpl() const { return new AmoebaAngleForceImpl(*this); } void AmoebaAngleForce::updateParametersInContext(Context& context) { dynamic_cast(getImplInContext(context)).updateParametersInContext(getContextImpl(context)); }