/* -------------------------------------------------------------------------- *
* OpenMMAmoeba *
* -------------------------------------------------------------------------- *
* This is part of the OpenMM molecular simulation toolkit originating from *
* Simbios, the NIH National Center for Physics-Based Simulation of *
* Biological Structures at Stanford, funded under the NIH Roadmap for *
* Medical Research, grant U54 GM072970. See https://simtk.org. *
* *
* Portions copyright (c) 2008-2021 Stanford University and the Authors. *
* Authors: Peter Eastman, Mark Friedrichs *
* Contributors: *
* *
* This program is free software: you can redistribute it and/or modify *
* it under the terms of the GNU Lesser General Public License as published *
* by the Free Software Foundation, either version 3 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU Lesser General Public License for more details. *
* *
* You should have received a copy of the GNU Lesser General Public License *
* along with this program. If not, see . *
* -------------------------------------------------------------------------- */
#include "AmoebaOpenCLKernels.h"
using namespace OpenMM;
using namespace std;
/* -------------------------------------------------------------------------- *
* HippoNonbondedForce *
* -------------------------------------------------------------------------- */
OpenCLCalcHippoNonbondedForceKernel::~OpenCLCalcHippoNonbondedForceKernel() {
if (sort != NULL)
delete sort;
}
void OpenCLCalcHippoNonbondedForceKernel::initialize(const System& system, const HippoNonbondedForce& force) {
CommonCalcHippoNonbondedForceKernel::initialize(system, force);
if (usePME) {
OpenCLContext& cl = dynamic_cast(cc);
sort = new OpenCLSort(cl, new SortTrait(), cc.getNumAtoms());
}
}
void OpenCLCalcHippoNonbondedForceKernel::sortGridIndex() {
sort->sort(dynamic_cast(cc).unwrap(pmeAtomGridIndex));
}