Initial Amoeba

f7f79b04 · Mark Friedrichs · 5003591d · f7f79b04 · f7f79b04 · f7f79b04
Commit f7f79b04 authored Jul 22, 2010 by Mark Friedrichs
20 changed files
--- a/plugins/amoeba/openmmapi/src/AmoebaMultipoleForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaMultipoleForceImpl.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaOutOfPlaneBendForce.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaOutOfPlaneBendForce.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaOutOfPlaneBendForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaOutOfPlaneBendForceImpl.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaPiTorsionForce.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaPiTorsionForce.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaPiTorsionForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaPiTorsionForceImpl.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaSASAForce.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaSASAForce.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaSASAForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaSASAForceImpl.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaStretchBendForce.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaStretchBendForce.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaStretchBendForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaStretchBendForceImpl.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaTorsionForce.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaTorsionForce.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaTorsionForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaTorsionForceImpl.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForce.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForce.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaVdwForce.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaVdwForce.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaVdwForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaVdwForceImpl.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForce.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForce.cpp
--- a/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp
+++ b/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp
--- a/plugins/amoeba/platforms/cuda/CMakeLists.txt
+++ b/plugins/amoeba/platforms/cuda/CMakeLists.txt
--- a/plugins/amoeba/platforms/cuda/include/AmoebaCudaKernelFactory.h
+++ b/plugins/amoeba/platforms/cuda/include/AmoebaCudaKernelFactory.h
--- a/plugins/amoeba/platforms/cuda/sharedTarget/CMakeLists.txt
+++ b/plugins/amoeba/platforms/cuda/sharedTarget/CMakeLists.txt