Added updateParametersInContext() methods to most AMOEBA forces.

plugins/amoeba/openmmapi/include/openmm/internal/AmoebaWcaDispersionForceImpl.h

@@ -79,6 +79,7 @@ public:
      * @return total maximum dispersion energy for the system
      */
     static double getTotalMaximumDispersionEnergy( const AmoebaWcaDispersionForce& force);
+    void updateParametersInContext(ContextImpl& context);
 
 private:
     AmoebaWcaDispersionForce& owner;

plugins/amoeba/openmmapi/src/AmoebaAngleForce.cpp

@@ -98,3 +98,7 @@ void AmoebaAngleForce::setAmoebaGlobalAngleSextic(double sexticK ) {
 ForceImpl* AmoebaAngleForce::createImpl() {
     return new AmoebaAngleForceImpl(*this);
 }
+
+void AmoebaAngleForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaAngleForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaAngleForceImpl.cpp

@@ -62,3 +62,6 @@ std::vector<std::string> AmoebaAngleForceImpl::getKernelNames() {
     return names;
 }
 
+void AmoebaAngleForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaAngleForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaBondForce.cpp

@@ -78,3 +78,7 @@ double AmoebaBondForce::getAmoebaGlobalBondQuartic( void ) const {
 ForceImpl* AmoebaBondForce::createImpl() {
     return new AmoebaBondForceImpl(*this);
 }
+
+void AmoebaBondForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaBondForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaBondForceImpl.cpp

@@ -72,3 +72,7 @@ vector<pair<int, int> > AmoebaBondForceImpl::getBondedParticles() const {
     }   
     return bonds;
 }
+
+void AmoebaBondForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaBondForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp

@@ -93,3 +93,7 @@ void AmoebaGeneralizedKirkwoodForce::setSurfaceAreaFactor(double inputSurfaceAre
 ForceImpl* AmoebaGeneralizedKirkwoodForce::createImpl() {
     return new AmoebaGeneralizedKirkwoodForceImpl(*this);
 }
+
+void AmoebaGeneralizedKirkwoodForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaGeneralizedKirkwoodForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp

@@ -63,3 +63,7 @@ std::vector<std::string> AmoebaGeneralizedKirkwoodForceImpl::getKernelNames() {
     names.push_back(CalcAmoebaGeneralizedKirkwoodForceKernel::Name());
     return names;
 }
+
+void AmoebaGeneralizedKirkwoodForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaGeneralizedKirkwoodForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaInPlaneAngleForce.cpp

@@ -100,3 +100,7 @@ double AmoebaInPlaneAngleForce::getAmoebaGlobalInPlaneAngleSextic( void ) const
 ForceImpl* AmoebaInPlaneAngleForce::createImpl() {
     return new AmoebaInPlaneAngleForceImpl(*this);
 }
+
+void AmoebaInPlaneAngleForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaInPlaneAngleForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaInPlaneAngleForceImpl.cpp

@@ -62,3 +62,6 @@ std::vector<std::string> AmoebaInPlaneAngleForceImpl::getKernelNames() {
     return names;
 }
 
+void AmoebaInPlaneAngleForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaInPlaneAngleForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaMultipoleForce.cpp

@@ -237,3 +237,7 @@ void AmoebaMultipoleForce::getSystemMultipoleMoments(Context& context, std::vect
 ForceImpl* AmoebaMultipoleForce::createImpl() {
     return new AmoebaMultipoleForceImpl(*this);
 }
+
+void AmoebaMultipoleForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaMultipoleForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaMultipoleForceImpl.cpp

@@ -192,3 +192,6 @@ void AmoebaMultipoleForceImpl::getSystemMultipoleMoments( ContextImpl& context,
     kernel.getAs<CalcAmoebaMultipoleForceKernel>().getSystemMultipoleMoments(context, outputMultipoleMonents);
 }
 
+void AmoebaMultipoleForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaMultipoleForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaOutOfPlaneBendForce.cpp

@@ -102,3 +102,7 @@ void AmoebaOutOfPlaneBendForce::setOutOfPlaneBendParameters(int index, int parti
 ForceImpl* AmoebaOutOfPlaneBendForce::createImpl() {
     return new AmoebaOutOfPlaneBendForceImpl(*this);
 }
+
+void AmoebaOutOfPlaneBendForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaOutOfPlaneBendForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaOutOfPlaneBendForceImpl.cpp

@@ -62,3 +62,6 @@ std::vector<std::string> AmoebaOutOfPlaneBendForceImpl::getKernelNames() {
     return names;
 }
 
+void AmoebaOutOfPlaneBendForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaOutOfPlaneBendForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaPiTorsionForce.cpp

@@ -67,3 +67,7 @@ void AmoebaPiTorsionForce::setPiTorsionParameters(int index, int particle1, int
 ForceImpl* AmoebaPiTorsionForce::createImpl() {
     return new AmoebaPiTorsionForceImpl(*this);
 }
+
+void AmoebaPiTorsionForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaPiTorsionForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaPiTorsionForceImpl.cpp

@@ -62,3 +62,6 @@ std::vector<std::string> AmoebaPiTorsionForceImpl::getKernelNames() {
     return names;
 }
 
+void AmoebaPiTorsionForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaPiTorsionForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaStretchBendForce.cpp

@@ -70,3 +70,7 @@ void AmoebaStretchBendForce::setStretchBendParameters(int index, int particle1,
 ForceImpl* AmoebaStretchBendForce::createImpl() {
     return new AmoebaStretchBendForceImpl(*this);
 }
+
+void AmoebaStretchBendForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaStretchBendForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaStretchBendForceImpl.cpp

@@ -62,3 +62,6 @@ std::vector<std::string> AmoebaStretchBendForceImpl::getKernelNames() {
     return names;
 }
 
+void AmoebaStretchBendForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaStretchBendForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaVdwForce.cpp

@@ -122,3 +122,6 @@ ForceImpl* AmoebaVdwForce::createImpl() {
     return new AmoebaVdwForceImpl(*this);
 }
 
+void AmoebaVdwForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaVdwForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}

plugins/amoeba/openmmapi/src/AmoebaVdwForceImpl.cpp

@@ -244,4 +244,6 @@ std::vector<std::string> AmoebaVdwForceImpl::getKernelNames() {
     return names;
 }
 
-
+void AmoebaVdwForceImpl::updateParametersInContext(ContextImpl& context) {
+    kernel.getAs<CalcAmoebaVdwForceKernel>().copyParametersToContext(context, owner);
+}

plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForce.cpp

@@ -130,3 +130,7 @@ void AmoebaWcaDispersionForce::setSlevy( double inputSlevy ){
 ForceImpl* AmoebaWcaDispersionForce::createImpl() {
     return new AmoebaWcaDispersionForceImpl(*this);
 }
+
+void AmoebaWcaDispersionForce::updateParametersInContext(Context& context) {
+    dynamic_cast<AmoebaWcaDispersionForceImpl&>(getImplInContext(context)).updateParametersInContext(getContextImpl(context));
+}