Reorganized headers for Lepton.

libraries/lepton/include/Lepton.h

+#ifndef LEPTON_H_
+#define LEPTON_H_
+
+/* -------------------------------------------------------------------------- *
+ *                                   Lepton                                   *
+ * -------------------------------------------------------------------------- *
+ * This is part of the Lepton expression parser originating from              *
+ * Simbios, the NIH National Center for Physics-Based Simulation of           *
+ * Biological Structures at Stanford, funded under the NIH Roadmap for        *
+ * Medical Research, grant U54 GM072970. See https://simtk.org.               *
+ *                                                                            *
+ * Portions copyright (c) 2009 Stanford University and the Authors.           *
+ * Authors: Peter Eastman                                                     *
+ * Contributors:                                                              *
+ *                                                                            *
+ * Permission is hereby granted, free of charge, to any person obtaining a    *
+ * copy of this software and associated documentation files (the "Software"), *
+ * to deal in the Software without restriction, including without limitation  *
+ * the rights to use, copy, modify, merge, publish, distribute, sublicense,   *
+ * and/or sell copies of the Software, and to permit persons to whom the      *
+ * Software is furnished to do so, subject to the following conditions:       *
+ *                                                                            *
+ * The above copyright notice and this permission notice shall be included in *
+ * all copies or substantial portions of the Software.                        *
+ *                                                                            *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR *
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,   *
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL    *
+ * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,    *
+ * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR      *
+ * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE  *
+ * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
+ * -------------------------------------------------------------------------- */
+
+#include "lepton/CustomFunction.h"
+#include "lepton/ExpressionProgram.h"
+#include "lepton/ExpressionTreeNode.h"
+#include "lepton/Operation.h"
+#include "lepton/ParsedExpression.h"
+#include "lepton/Parser.h"
+
+#endif /*LEPTON_H_*/

libraries/lepton/src/ExpressionProgram.cpp

@@ -29,9 +29,9 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "ExpressionProgram.h"
-#include "Operation.h"
-#include "ParsedExpression.h"
+#include "lepton/ExpressionProgram.h"
+#include "lepton/Operation.h"
+#include "lepton/ParsedExpression.h"
 
 using namespace Lepton;
 using namespace std;

libraries/lepton/src/ExpressionTreeNode.cpp

@@ -29,9 +29,9 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "ExpressionTreeNode.h"
-#include "Exception.h"
-#include "Operation.h"
+#include "lepton/ExpressionTreeNode.h"
+#include "lepton/Exception.h"
+#include "lepton/Operation.h"
 
 using namespace Lepton;
 using namespace std;

libraries/lepton/src/Operation.cpp

@@ -30,8 +30,8 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "Operation.h"
-#include "ExpressionTreeNode.h"
+#include "lepton/Operation.h"
+#include "lepton/ExpressionTreeNode.h"
 
 using namespace Lepton;
 using namespace std;

libraries/lepton/src/ParsedExpression.cpp

@@ -29,9 +29,9 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "ParsedExpression.h"
-#include "ExpressionProgram.h"
-#include "Operation.h"
+#include "lepton/ParsedExpression.h"
+#include "lepton/ExpressionProgram.h"
+#include "lepton/Operation.h"
 #include <limits>
 #include <vector>
 

libraries/lepton/src/Parser.cpp

@@ -29,12 +29,12 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "Parser.h"
-#include "CustomFunction.h"
-#include "Exception.h"
-#include "ExpressionTreeNode.h"
-#include "Operation.h"
-#include "ParsedExpression.h"
+#include "lepton/Parser.h"
+#include "lepton/CustomFunction.h"
+#include "lepton/Exception.h"
+#include "lepton/ExpressionTreeNode.h"
+#include "lepton/Operation.h"
+#include "lepton/ParsedExpression.h"
 #include <iostream>
 
 using namespace Lepton;