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tsoc
openmm
Commits
de4c93f8
Commit
de4c93f8
authored
Oct 26, 2018
by
Peter Eastman
Browse files
Possible(?) fix for PME energy error
parent
45d91501
Changes
2
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platforms/cuda/src/CudaKernels.cpp
platforms/cuda/src/CudaKernels.cpp
+1
-0
platforms/opencl/src/OpenCLKernels.cpp
platforms/opencl/src/OpenCLKernels.cpp
+1
-0
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platforms/cuda/src/CudaKernels.cpp
View file @
de4c93f8
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@@ -1822,6 +1822,7 @@ void CudaCalcNonbondedForceKernel::initialize(const System& system, const Nonbon
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@@ -1822,6 +1822,7 @@ void CudaCalcNonbondedForceKernel::initialize(const System& system, const Nonbon
pmeAtomGridIndex.initialize<int2>(cu, numParticles, "pmeAtomGridIndex");
pmeAtomGridIndex.initialize<int2>(cu, numParticles, "pmeAtomGridIndex");
int energyElementSize = (cu.getUseDoublePrecision() || cu.getUseMixedPrecision() ? sizeof(double) : sizeof(float));
int energyElementSize = (cu.getUseDoublePrecision() || cu.getUseMixedPrecision() ? sizeof(double) : sizeof(float));
pmeEnergyBuffer.initialize(cu, cu.getNumThreadBlocks()*CudaContext::ThreadBlockSize, energyElementSize, "pmeEnergyBuffer");
pmeEnergyBuffer.initialize(cu, cu.getNumThreadBlocks()*CudaContext::ThreadBlockSize, energyElementSize, "pmeEnergyBuffer");
cu.clearBuffer(pmeEnergyBuffer);
sort = new CudaSort(cu, new SortTrait(), cu.getNumAtoms());
sort = new CudaSort(cu, new SortTrait(), cu.getNumAtoms());
int cufftVersion;
int cufftVersion;
cufftGetVersion(&cufftVersion);
cufftGetVersion(&cufftVersion);
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platforms/opencl/src/OpenCLKernels.cpp
View file @
de4c93f8
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@@ -1780,6 +1780,7 @@ void OpenCLCalcNonbondedForceKernel::initialize(const System& system, const Nonb
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@@ -1780,6 +1780,7 @@ void OpenCLCalcNonbondedForceKernel::initialize(const System& system, const Nonb
pmeAtomGridIndex.initialize<mm_int2>(cl, numParticles, "pmeAtomGridIndex");
pmeAtomGridIndex.initialize<mm_int2>(cl, numParticles, "pmeAtomGridIndex");
int energyElementSize = (cl.getUseDoublePrecision() || cl.getUseMixedPrecision() ? sizeof(double) : sizeof(float));
int energyElementSize = (cl.getUseDoublePrecision() || cl.getUseMixedPrecision() ? sizeof(double) : sizeof(float));
pmeEnergyBuffer.initialize(cl, cl.getNumThreadBlocks()*OpenCLContext::ThreadBlockSize, energyElementSize, "pmeEnergyBuffer");
pmeEnergyBuffer.initialize(cl, cl.getNumThreadBlocks()*OpenCLContext::ThreadBlockSize, energyElementSize, "pmeEnergyBuffer");
cl.clearBuffer(pmeEnergyBuffer);
sort = new OpenCLSort(cl, new SortTrait(), cl.getNumAtoms());
sort = new OpenCLSort(cl, new SortTrait(), cl.getNumAtoms());
fft = new OpenCLFFT3D(cl, gridSizeX, gridSizeY, gridSizeZ, true);
fft = new OpenCLFFT3D(cl, gridSizeX, gridSizeY, gridSizeZ, true);
if (doLJPME)
if (doLJPME)
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