Commit be856c22 authored by Evan Pretti's avatar Evan Pretti
Browse files

Remove some references to SimTK

parent eb3150ef
......@@ -7,8 +7,8 @@
#
# REQUIREMENTS
#
# numpy - Scientific computing package - http://numpy.scipy.org
# pymbar - Python implementation of MBAR - https://simtk.org/home/pymbar
# numpy - Scientific computing package - https://numpy.org/
# pymbar - Python implementation of MBAR - https://github.com/choderalab/pymbar
#
# REFERENCES
#
......
......@@ -141,7 +141,7 @@ bool OpenCLPlatform::isPlatformSupported() {
if (major < 14 || (major == 14 && minor < 3))
// 14.3.0 is the darwin release corresponding to OS X 10.10.3. Versions prior to that
// contained a number of serious bugs in the Apple OpenCL libraries.
// (See https://github.com/SimTk/openmm/issues/395 for example.)
// (See https://github.com/openmm/openmm/issues/395 for example.)
return false;
#endif
......
"""
Pure python inversion of small matrices, to avoid requiring numpy or similar in SimTK.
Pure python inversion of small matrices, to avoid requiring numpy or similar in OpenMM.
This is part of the OpenMM molecular simulation toolkit originating from
Simbios, the NIH National Center for Physics-Based Simulation of
......
......@@ -32,7 +32,7 @@ Some features of this implementation:
area for us is at the molecular scale. Using SI units internally
can lead to exponent overflow in commonly used molecular force
calculations. Internally, all unit systems are equally fundamental
in SimTK.
in OpenMM.
Two possible enhancements that have not been implemented are
1) Include uncertainties with propagation of errors
......
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