Deleted free energy plugin

plugins/freeEnergy/serialization/tests/TestSerializeFreeEnergyNonbondedSoftcoreForce.cpp

-/* -------------------------------------------------------------------------- *
- *                                OpenMMAmoeba                                *
- * -------------------------------------------------------------------------- *
- * This is part of the OpenMM molecular simulation toolkit originating from   *
- * Simbios, the NIH National Center for Physics-Based Simulation of           *
- * Biological Structures at Stanford, funded under the NIH Roadmap for        *
- * Medical Research, grant U54 GM072970. See https://simtk.org.               *
- *                                                                            *
- * Portions copyright (c) 2010 Stanford University and the Authors.           *
- * Authors: Peter Eastman                                                     *
- * Contributors:                                                              *
- *                                                                            *
- * Permission is hereby granted, free of charge, to any person obtaining a    *
- * copy of this software and associated documentation files (the "Software"), *
- * to deal in the Software without restriction, including without limitation  *
- * the rights to use, copy, modify, merge, publish, distribute, sublicense,   *
- * and/or sell copies of the Software, and to permit persons to whom the      *
- * Software is furnished to do so, subject to the following conditions:       *
- *                                                                            *
- * The above copyright notice and this permission notice shall be included in *
- * all copies or substantial portions of the Software.                        *
- *                                                                            *
- * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR *
- * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,   *
- * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL    *
- * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,    *
- * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR      *
- * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE  *
- * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
- * -------------------------------------------------------------------------- */
-
-#include "openmm/internal/AssertionUtilities.h"
-#include "openmm/NonbondedSoftcoreForce.h"
-#include "openmm/serialization/XmlSerializer.h"
-#include <iostream>
-#include <sstream>
-
-using namespace OpenMM;
-using namespace std;
-
-void testSerialization() {
-
-    // Create a Force.
-
-    NonbondedSoftcoreForce force;
-    force.setNonbondedMethod(NonbondedSoftcoreForce::CutoffPeriodic);
-    force.setCutoffDistance(2.0);
-    //force.setEwaldErrorTolerance(1e-3);
-    force.setReactionFieldDielectric(50.0);
-    //force.setUseDispersionCorrection(false);
-    force.addParticle(1, 0.1, 0.01);
-    force.addParticle(0.5, 0.2, 0.02);
-    force.addParticle(-0.5, 0.3, 0.03);
-    force.addException(0, 1, 2, 0.5, 0.1);
-    force.addException(1, 2, 0.2, 0.4, 0.2);
-
-    // Serialize and then deserialize it.
-
-    stringstream buffer;
-    XmlSerializer::serialize<NonbondedSoftcoreForce>(&force, "Force", buffer);
-    NonbondedSoftcoreForce* copy = XmlSerializer::deserialize<NonbondedSoftcoreForce>(buffer);
-
-    // Compare the two forces to see if they are identical.
-
-    NonbondedSoftcoreForce& force2 = *copy;
-    ASSERT_EQUAL(force.getNonbondedMethod(), force2.getNonbondedMethod());
-    ASSERT_EQUAL(force.getCutoffDistance(), force2.getCutoffDistance());
-    //ASSERT_EQUAL(force.getEwaldErrorTolerance(), force2.getEwaldErrorTolerance());
-    ASSERT_EQUAL(force.getReactionFieldDielectric(), force2.getReactionFieldDielectric());
-    //ASSERT_EQUAL(force.getUseDispersionCorrection(), force2.getUseDispersionCorrection());
-    ASSERT_EQUAL(force.getNumParticles(), force2.getNumParticles());
-    for (int i = 0; i < force.getNumParticles(); i++) {
-        double charge1, sigma1, epsilon1, lambda1;
-        double charge2, sigma2, epsilon2, lambda2;
-        force.getParticleParameters(i, charge1, sigma1, epsilon1, lambda1);
-        force2.getParticleParameters(i, charge2, sigma2, epsilon2, lambda2);
-        ASSERT_EQUAL(charge1, charge2);
-        ASSERT_EQUAL(sigma1, sigma2);
-        ASSERT_EQUAL(epsilon1, epsilon2);
-        ASSERT_EQUAL(lambda1, lambda2);
-    }
-    ASSERT_EQUAL(force.getNumExceptions(), force2.getNumExceptions());
-    for (int i = 0; i < force.getNumExceptions(); i++) {
-        int a1, a2, b1, b2;
-        double charge1, sigma1, epsilon1, lambda1;
-        double charge2, sigma2, epsilon2, lambda2;
-        force.getExceptionParameters(i, a1, b1, charge1, sigma1, epsilon1, lambda1);
-        force2.getExceptionParameters(i, a2, b2, charge2, sigma2, epsilon2, lambda2);
-        ASSERT_EQUAL(a1, a2);
-        ASSERT_EQUAL(b1, b2);
-        ASSERT_EQUAL(charge1, charge2);
-        ASSERT_EQUAL(sigma1, sigma2);
-        ASSERT_EQUAL(epsilon1, epsilon2);
-        ASSERT_EQUAL(lambda1, lambda2);
-    }
-}
-
-int main() {
-    try {
-        testSerialization();
-    }
-    catch(const exception& e) {
-        cout << "exception: " << e.what() << endl;
-        return 1;
-    }
-    cout << "Done" << endl;
-    return 0;
-}