Merge pull request #1332 from jchodera/test-docs

Also build the HTML user guide in travis

.travis.yml

@@ -148,9 +148,12 @@ script:
   - python devtools/run-ctest.py --start-time $START_TIME
 
   - if [[ ! -z "${DOCS_DEPLOY}" && "${DOCS_DEPLOY}" = "true" ]]; then
-      pip install sphinx sphinxcontrib-lunrsearch sphinxcontrib-autodoc_doxygen;
+      pip install sphinx sphinxcontrib-bibtex sphinxcontrib-lunrsearch sphinxcontrib-autodoc_doxygen;
+      make sphinxhtml;
       make C++ApiDocs PythonApiDocs;
       mkdir -p api-docs;
+      mv sphinx-docs/userguide api-docs;
+      mv sphinx-docs/developerguide api-docs;
       mv api-python api-docs;
       mv api-c++ api-docs;
     fi

docs-source/usersguide/application.rst

@@ -2747,10 +2747,12 @@ modified residues, covalently-bound ligands, or unnatural amino acids or bases.
 To register a new residue template generator named :code:`generator`, simply call the
 :meth:`registerTemplateGenerator` method on an existing :class:`ForceField` object:
 ::
+
     forcefield.registerTemplateGenerator(generator)
 
 This :code:`generator` function must conform to the following API:
 ::
+
     def generator(forcefield, residue):
         """
         Parameters