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tsoc
openmm
Commits
6bb532ac
Commit
6bb532ac
authored
Nov 20, 2015
by
peastman
Browse files
Increased SHAKE iterations when positioning extra particles
parent
b20c20fe
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wrappers/python/simtk/openmm/app/modeller.py
wrappers/python/simtk/openmm/app/modeller.py
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wrappers/python/simtk/openmm/app/modeller.py
View file @
6bb532ac
...
...
@@ -1109,7 +1109,7 @@ class Modeller(object):
# Now run a few iterations of SHAKE to try to select reasonable positions.
for
iteration
in
range
(
1
0
):
for
iteration
in
range
(
1
5
):
for
atom1
,
atom2
,
distance
in
bonds
:
if
atom1
in
missingPositions
:
if
atom2
in
missingPositions
:
...
...
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