Moved header files into an openmm subdirectory

openmmapi/include/internal/HarmonicBondForceImpl.h → openmmapi/include/openmm/internal/HarmonicBondForceImpl.h

@@ -33,8 +33,8 @@
  * -------------------------------------------------------------------------- */
 
 #include "ForceImpl.h"
-#include "HarmonicBondForce.h"
-#include "Kernel.h"
+#include "openmm/HarmonicBondForce.h"
+#include "openmm/Kernel.h"
 #include <utility>
 #include <set>
 #include <string>

openmmapi/include/internal/NonbondedForceImpl.h → openmmapi/include/openmm/internal/NonbondedForceImpl.h

@@ -33,8 +33,8 @@
  * -------------------------------------------------------------------------- */
 
 #include "ForceImpl.h"
-#include "NonbondedForce.h"
-#include "Kernel.h"
+#include "openmm/NonbondedForce.h"
+#include "openmm/Kernel.h"
 #include <utility>
 #include <set>
 #include <string>

openmmapi/include/internal/OpenMMContextImpl.h → openmmapi/include/openmm/internal/OpenMMContextImpl.h

@@ -32,9 +32,9 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "Kernel.h"
-#include "Platform.h"
-#include "Stream.h"
+#include "openmm/Kernel.h"
+#include "openmm/Platform.h"
+#include "openmm/Stream.h"
 #include <map>
 #include <vector>
 

openmmapi/include/internal/PeriodicTorsionForceImpl.h → openmmapi/include/openmm/internal/PeriodicTorsionForceImpl.h

@@ -33,8 +33,8 @@
  * -------------------------------------------------------------------------- */
 
 #include "ForceImpl.h"
-#include "PeriodicTorsionForce.h"
-#include "Kernel.h"
+#include "openmm/PeriodicTorsionForce.h"
+#include "openmm/Kernel.h"
 #include <utility>
 #include <set>
 #include <string>

openmmapi/include/internal/RBTorsionForceImpl.h → openmmapi/include/openmm/internal/RBTorsionForceImpl.h

@@ -33,8 +33,8 @@
  * -------------------------------------------------------------------------- */
 
 #include "ForceImpl.h"
-#include "RBTorsionForce.h"
-#include "Kernel.h"
+#include "openmm/RBTorsionForce.h"
+#include "openmm/Kernel.h"
 #include <utility>
 #include <set>
 #include <string>

openmmapi/src/AndersenThermostat.cpp

@@ -29,8 +29,8 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "AndersenThermostat.h"
-#include "internal/AndersenThermostatImpl.h"
+#include "openmm/AndersenThermostat.h"
+#include "openmm/internal/AndersenThermostatImpl.h"
 #include <ctime>
 
 using namespace OpenMM;

openmmapi/src/AndersenThermostatImpl.cpp

@@ -29,11 +29,11 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "internal/AndersenThermostatImpl.h"
-#include "internal/OpenMMContextImpl.h"
-#include "Integrator.h"
-#include "System.h"
-#include "kernels.h"
+#include "openmm/internal/AndersenThermostatImpl.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/Integrator.h"
+#include "openmm/System.h"
+#include "openmm/kernels.h"
 #include <vector>
 
 using namespace OpenMM;

openmmapi/src/BrownianIntegrator.cpp

@@ -29,10 +29,10 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "BrownianIntegrator.h"
-#include "OpenMMContext.h"
-#include "internal/OpenMMContextImpl.h"
-#include "kernels.h"
+#include "openmm/BrownianIntegrator.h"
+#include "openmm/OpenMMContext.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/kernels.h"
 #include <ctime>
 #include <string>
 

openmmapi/src/CMMotionRemover.cpp

@@ -29,8 +29,8 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "CMMotionRemover.h"
-#include "internal/CMMotionRemoverImpl.h"
+#include "openmm/CMMotionRemover.h"
+#include "openmm/internal/CMMotionRemoverImpl.h"
 
 using namespace OpenMM;
 

openmmapi/src/CMMotionRemoverImpl.cpp

@@ -29,11 +29,11 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "internal/CMMotionRemoverImpl.h"
-#include "internal/OpenMMContextImpl.h"
-#include "Integrator.h"
-#include "System.h"
-#include "kernels.h"
+#include "openmm/internal/CMMotionRemoverImpl.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/Integrator.h"
+#include "openmm/System.h"
+#include "openmm/kernels.h"
 #include <vector>
 
 using namespace OpenMM;

openmmapi/src/GBSAOBCForce.cpp

@@ -29,10 +29,10 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "Force.h"
-#include "OpenMMException.h"
-#include "GBSAOBCForce.h"
-#include "internal/GBSAOBCForceImpl.h"
+#include "openmm/Force.h"
+#include "openmm/OpenMMException.h"
+#include "openmm/GBSAOBCForce.h"
+#include "openmm/internal/GBSAOBCForceImpl.h"
 
 using namespace OpenMM;
 

openmmapi/src/GBSAOBCForceImpl.cpp

@@ -29,10 +29,10 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "OpenMMException.h"
-#include "internal/GBSAOBCForceImpl.h"
-#include "internal/OpenMMContextImpl.h"
-#include "kernels.h"
+#include "openmm/OpenMMException.h"
+#include "openmm/internal/GBSAOBCForceImpl.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/kernels.h"
 #include <vector>
 
 using namespace OpenMM;

openmmapi/src/GBVIForce.cpp

@@ -29,10 +29,10 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "Force.h"
-#include "OpenMMException.h"
-#include "GBVIForce.h"
-#include "internal/GBVIForceImpl.h"
+#include "openmm/Force.h"
+#include "openmm/OpenMMException.h"
+#include "openmm/GBVIForce.h"
+#include "openmm/internal/GBVIForceImpl.h"
 
 using namespace OpenMM;
 

openmmapi/src/GBVIForceImpl.cpp

@@ -29,10 +29,10 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "internal/GBVIForceImpl.h"
-#include "internal/OpenMMContextImpl.h"
-#include "OpenMMException.h"
-#include "kernels.h"
+#include "openmm/internal/GBVIForceImpl.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/OpenMMException.h"
+#include "openmm/kernels.h"
 #include <vector>
 #include <math.h>
 

openmmapi/src/HarmonicAngleForce.cpp

@@ -29,10 +29,10 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "Force.h"
-#include "OpenMMException.h"
-#include "HarmonicAngleForce.h"
-#include "internal/HarmonicAngleForceImpl.h"
+#include "openmm/Force.h"
+#include "openmm/OpenMMException.h"
+#include "openmm/HarmonicAngleForce.h"
+#include "openmm/internal/HarmonicAngleForceImpl.h"
 
 using namespace OpenMM;
 

openmmapi/src/HarmonicAngleForceImpl.cpp

@@ -29,9 +29,9 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "internal/OpenMMContextImpl.h"
-#include "internal/HarmonicAngleForceImpl.h"
-#include "kernels.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/internal/HarmonicAngleForceImpl.h"
+#include "openmm/kernels.h"
 
 using namespace OpenMM;
 using std::pair;

openmmapi/src/HarmonicBondForce.cpp

@@ -29,10 +29,10 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "Force.h"
-#include "OpenMMException.h"
-#include "HarmonicBondForce.h"
-#include "internal/HarmonicBondForceImpl.h"
+#include "openmm/Force.h"
+#include "openmm/OpenMMException.h"
+#include "openmm/HarmonicBondForce.h"
+#include "openmm/internal/HarmonicBondForceImpl.h"
 
 using namespace OpenMM;
 

openmmapi/src/HarmonicBondForceImpl.cpp

@@ -29,9 +29,9 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "internal/OpenMMContextImpl.h"
-#include "internal/HarmonicBondForceImpl.h"
-#include "kernels.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/internal/HarmonicBondForceImpl.h"
+#include "openmm/kernels.h"
 
 using namespace OpenMM;
 using std::pair;

openmmapi/src/LangevinIntegrator.cpp

@@ -29,10 +29,10 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "LangevinIntegrator.h"
-#include "OpenMMContext.h"
-#include "internal/OpenMMContextImpl.h"
-#include "kernels.h"
+#include "openmm/LangevinIntegrator.h"
+#include "openmm/OpenMMContext.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/kernels.h"
 #include <ctime>
 #include <string>