Moved header files into an openmm subdirectory

platforms/cuda/tests/TestCudaHarmonicBondForce.cpp

@@ -34,11 +34,11 @@
  */
 
 #include "../../../tests/AssertionUtilities.h"
-#include "OpenMMContext.h"
+#include "openmm/OpenMMContext.h"
 #include "CudaPlatform.h"
-#include "HarmonicBondForce.h"
-#include "System.h"
-#include "LangevinIntegrator.h"
+#include "openmm/HarmonicBondForce.h"
+#include "openmm/System.h"
+#include "openmm/LangevinIntegrator.h"
 #include "../src/SimTKUtilities/SimTKOpenMMRealType.h"
 #include <iostream>
 #include <vector>

platforms/cuda/tests/TestCudaLangevinIntegrator.cpp

@@ -34,12 +34,12 @@
  */
 
 #include "../../../tests/AssertionUtilities.h"
-#include "OpenMMContext.h"
+#include "openmm/OpenMMContext.h"
 #include "CudaPlatform.h"
-#include "HarmonicBondForce.h"
-#include "NonbondedForce.h"
-#include "System.h"
-#include "LangevinIntegrator.h"
+#include "openmm/HarmonicBondForce.h"
+#include "openmm/NonbondedForce.h"
+#include "openmm/System.h"
+#include "openmm/LangevinIntegrator.h"
 #include "../src/SimTKUtilities/SimTKOpenMMRealType.h"
 #include "../src/sfmt/SFMT.h"
 #include <iostream>

platforms/cuda/tests/TestCudaNonbondedForce.cpp

@@ -34,15 +34,15 @@
  */
 
 #include "../../../tests/AssertionUtilities.h"
-#include "OpenMMContext.h"
+#include "openmm/OpenMMContext.h"
 #include "CudaPlatform.h"
 #include "ReferencePlatform.h"
-#include "HarmonicBondForce.h"
-#include "NonbondedForce.h"
-#include "System.h"
-#include "LangevinIntegrator.h"
-#include "VerletIntegrator.h"
-#include "internal/OpenMMContextImpl.h"
+#include "openmm/HarmonicBondForce.h"
+#include "openmm/NonbondedForce.h"
+#include "openmm/System.h"
+#include "openmm/LangevinIntegrator.h"
+#include "openmm/VerletIntegrator.h"
+#include "openmm/internal/OpenMMContextImpl.h"
 #include "kernels/gputypes.h"
 #include "../src/SimTKUtilities/SimTKOpenMMRealType.h"
 #include "../src/sfmt/SFMT.h"

platforms/cuda/tests/TestCudaPeriodicTorsionForce.cpp

@@ -34,11 +34,11 @@
  */
 
 #include "../../../tests/AssertionUtilities.h"
-#include "OpenMMContext.h"
+#include "openmm/OpenMMContext.h"
 #include "CudaPlatform.h"
-#include "PeriodicTorsionForce.h"
-#include "System.h"
-#include "LangevinIntegrator.h"
+#include "openmm/PeriodicTorsionForce.h"
+#include "openmm/System.h"
+#include "openmm/LangevinIntegrator.h"
 #include "../src/SimTKUtilities/SimTKOpenMMRealType.h"
 #include <iostream>
 #include <vector>

platforms/cuda/tests/TestCudaRBTorsionForce.cpp

@@ -34,11 +34,11 @@
  */
 
 #include "../../../tests/AssertionUtilities.h"
-#include "OpenMMContext.h"
+#include "openmm/OpenMMContext.h"
 #include "CudaPlatform.h"
-#include "RBTorsionForce.h"
-#include "System.h"
-#include "LangevinIntegrator.h"
+#include "openmm/RBTorsionForce.h"
+#include "openmm/System.h"
+#include "openmm/LangevinIntegrator.h"
 #include "../src/SimTKUtilities/SimTKOpenMMRealType.h"
 #include <iostream>
 #include <vector>

platforms/cuda/tests/TestCudaSettle.cpp

@@ -35,11 +35,11 @@
  */
 
 #include "../../../tests/AssertionUtilities.h"
-#include "OpenMMContext.h"
+#include "openmm/OpenMMContext.h"
 #include "CudaPlatform.h"
-#include "NonbondedForce.h"
-#include "System.h"
-#include "LangevinIntegrator.h"
+#include "openmm/NonbondedForce.h"
+#include "openmm/System.h"
+#include "openmm/LangevinIntegrator.h"
 #include "../src/sfmt/SFMT.h"
 #include <iostream>
 #include <vector>

platforms/cuda/tests/TestCudaStreams.cpp

@@ -35,9 +35,9 @@
 
 #include "../../../tests/AssertionUtilities.h"
 #include "CudaPlatform.h"
-#include "OpenMMContext.h"
-#include "Stream.h"
-#include "VerletIntegrator.h"
+#include "openmm/OpenMMContext.h"
+#include "openmm/Stream.h"
+#include "openmm/VerletIntegrator.h"
 #include <iostream>
 
 using namespace OpenMM;

platforms/cuda/tests/TestCudaVerletIntegrator.cpp

@@ -34,12 +34,12 @@
  */
 
 #include "../../../tests/AssertionUtilities.h"
-#include "OpenMMContext.h"
+#include "openmm/OpenMMContext.h"
 #include "CudaPlatform.h"
-#include "HarmonicBondForce.h"
-#include "NonbondedForce.h"
-#include "System.h"
-#include "VerletIntegrator.h"
+#include "openmm/HarmonicBondForce.h"
+#include "openmm/NonbondedForce.h"
+#include "openmm/System.h"
+#include "openmm/VerletIntegrator.h"
 #include "../src/SimTKUtilities/SimTKOpenMMRealType.h"
 #include "../src/sfmt/SFMT.h"
 #include <iostream>

platforms/reference/include/ReferenceKernelFactory.h

@@ -32,7 +32,7 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "KernelFactory.h"
+#include "openmm/KernelFactory.h"
 
 namespace OpenMM {
 

platforms/reference/include/ReferencePlatform.h

@@ -32,9 +32,9 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "Platform.h"
+#include "openmm/Platform.h"
 #include "ReferenceStreamFactory.h"
-#include "internal/windowsExport.h"
+#include "openmm/internal/windowsExport.h"
 
 namespace OpenMM {
 

platforms/reference/include/ReferenceStreamFactory.h

@@ -32,8 +32,8 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "StreamFactory.h"
-#include "internal/windowsExport.h"
+#include "openmm/StreamFactory.h"
+#include "openmm/internal/windowsExport.h"
 
 namespace OpenMM {
 

platforms/reference/src/ReferenceFloatStreamImpl.h

@@ -32,7 +32,7 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "StreamImpl.h"
+#include "openmm/StreamImpl.h"
 #include "SimTKUtilities/SimTKOpenMMRealType.h"
 
 namespace OpenMM {

platforms/reference/src/ReferenceIntStreamImpl.h

@@ -32,7 +32,7 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "StreamImpl.h"
+#include "openmm/StreamImpl.h"
 
 namespace OpenMM {
 

platforms/reference/src/ReferenceKernelFactory.cpp

@@ -31,7 +31,7 @@
 
 #include "ReferenceKernelFactory.h"
 #include "ReferenceKernels.h"
-#include "OpenMMException.h"
+#include "openmm/OpenMMException.h"
 
 using namespace OpenMM;
 

platforms/reference/src/ReferenceKernels.cpp

@@ -46,10 +46,10 @@
 #include "SimTKReference/ReferenceStochasticDynamics.h"
 #include "SimTKReference/ReferenceShakeAlgorithm.h"
 #include "SimTKReference/ReferenceVerletDynamics.h"
-#include "CMMotionRemover.h"
-#include "System.h"
-#include "internal/OpenMMContextImpl.h"
-#include "Integrator.h"
+#include "openmm/CMMotionRemover.h"
+#include "openmm/System.h"
+#include "openmm/internal/OpenMMContextImpl.h"
+#include "openmm/Integrator.h"
 #include "SimTKUtilities/SimTKOpenMMUtilities.h"
 #include <cmath>
 #include <limits>

platforms/reference/src/ReferenceKernels.h

@@ -32,7 +32,7 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "kernels.h"
+#include "openmm/kernels.h"
 #include "SimTKUtilities/SimTKOpenMMRealType.h"
 #include "SimTKReference/ReferenceNeighborList.h"
 

platforms/reference/src/ReferenceStreamFactory.cpp

@@ -29,7 +29,7 @@
  * USE OR OTHER DEALINGS IN THE SOFTWARE.                                     *
  * -------------------------------------------------------------------------- */
 
-#include "OpenMMException.h"
+#include "openmm/OpenMMException.h"
 #include "ReferenceStreamFactory.h"
 #include "ReferenceFloatStreamImpl.h"
 #include "ReferenceIntStreamImpl.h"

platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.h

@@ -25,7 +25,7 @@
 #define __ReferenceLincsAlgorithm_H__
 
 #include "ReferenceConstraintAlgorithm.h"
-#include "Vec3.h"
+#include "openmm/Vec3.h"
 #include <vector>
 
 // ---------------------------------------------------------------------------------------

platforms/reference/src/SimTKReference/ReferenceNeighborList.h

@@ -2,7 +2,7 @@
 #define OPENMM_REFERENCE_NEIGHBORLIST_H_
 
 #include "../SimTKUtilities/SimTKOpenMMRealType.h"
-#include "internal/windowsExport.h"
+#include "openmm/internal/windowsExport.h"
 #include <set>
 #include <vector>
 

platforms/reference/src/SimTKUtilities/SimTKOpenMMUtilities.h

@@ -29,7 +29,7 @@
 
 #include "SimTKOpenMMCommon.h" 
 #include "../sfmt/SFMT.h"
-#include "internal/windowsExport.h"
+#include "openmm/internal/windowsExport.h"
 
 #include <stdio.h>
 #include <string.h>