Merge pull request #47 from peastman/headers

Install platform specific header files, so plugins can be built without needing a full source tree

Merge pull request #47 from peastman/headers
Install platform specific header files, so plugins can be built without needing a full source tree
3279efe5 · peastman · 0e5073cf · 0534520e · 3279efe5 · 3279efe5
Commit 3279efe5 authored Jul 10, 2013 by peastman
20 changed files
--- a/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp
@@ -25,9 +25,9 @@
 #include <cstring>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceDynamics.h"

 #include <cstdio>

--- a/platforms/reference/src/SimTKReference/ReferenceForce.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceForce.cpp
@@ -25,9 +25,9 @@
 #include <cstring>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceForce.h"

 #include <cstdio>

--- a/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp
@@ -25,9 +25,9 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceHarmonicBondIxn.h"
 #include "ReferenceForce.h"


--- a/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp
@@ -25,9 +25,9 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceLJCoulomb14.h"
 #include "ReferenceForce.h"


--- a/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp
@@ -26,9 +26,9 @@
 #include <sstream>
 #include <complex>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceLJCoulombIxn.h"
 #include "ReferenceForce.h"
 #include "PME.h"

--- a/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp
@@ -24,9 +24,9 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMLog.h"
 #include "ReferenceLincsAlgorithm.h"
 #include "ReferenceDynamics.h"
 #include "openmm/OpenMMException.h"

--- a/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp
@@ -25,7 +25,7 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceMonteCarloBarostat.h"

 using namespace std;

--- a/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp
+++ b/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp
@@ -25,9 +25,9 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceForce.h"
 #include "ReferencePairIxn.h"


--- a/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp
@@ -25,9 +25,9 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceProperDihedralBond.h"
 #include "ReferenceForce.h"


--- a/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp
@@ -25,9 +25,9 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceRbDihedralBond.h"
 #include "ReferenceForce.h"


--- a/platforms/reference/src/SimTKReference/ReferenceShakeAlgorithm.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceShakeAlgorithm.cpp
@@ -25,9 +25,9 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMLog.h"
 #include "ReferenceShakeAlgorithm.h"
 #include "ReferenceDynamics.h"
 #include "openmm/OpenMMException.h"

--- a/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp
@@ -25,9 +25,9 @@
 #include <cstring>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceStochasticDynamics.h"
 #include "ReferenceVirtualSites.h"


--- a/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp
@@ -25,9 +25,9 @@
 #include <cstring>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceVariableStochasticDynamics.h"
 #include "ReferenceVirtualSites.h"


--- a/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp
@@ -25,9 +25,9 @@
 #include <string.h>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceVariableVerletDynamics.h"
 #include "ReferenceVirtualSites.h"


--- a/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp
@@ -25,9 +25,9 @@
 #include <cstring>
 #include <sstream>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKUtilities/SimTKOpenMMLog.h"
-#include "../SimTKUtilities/SimTKOpenMMUtilities.h"
+#include "SimTKOpenMMCommon.h"
+#include "SimTKOpenMMLog.h"
+#include "SimTKOpenMMUtilities.h"
 #include "ReferenceVerletDynamics.h"
 #include "ReferenceVirtualSites.h"


--- a/platforms/reference/src/gbsa/CpuGBVI.cpp
+++ b/platforms/reference/src/gbsa/CpuGBVI.cpp
@@ -26,8 +26,8 @@
 #include <sstream>
 #include <stdio.h>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKReference/ReferenceForce.h"
+#include "SimTKOpenMMCommon.h"
+#include "ReferenceForce.h"
 #include "CpuGBVI.h"

 using namespace std;

--- a/platforms/reference/src/gbsa/CpuObc.cpp
+++ b/platforms/reference/src/gbsa/CpuObc.cpp
@@ -28,8 +28,8 @@
 #include <cmath>
 #include <cstdio>

-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
-#include "../SimTKReference/ReferenceForce.h"
+#include "SimTKOpenMMCommon.h"
+#include "ReferenceForce.h"
 #include "CpuObc.h"

 using namespace OpenMM;

--- a/platforms/reference/src/gbsa/GBVIParameters.cpp
+++ b/platforms/reference/src/gbsa/GBVIParameters.cpp
@@ -28,7 +28,7 @@

 #include "openmm/OpenMMException.h"
 #include "GBVIParameters.h"
-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
+#include "SimTKOpenMMCommon.h"

 using std::vector;
 using OpenMM::RealVec;

--- a/platforms/reference/src/gbsa/ObcParameters.cpp
+++ b/platforms/reference/src/gbsa/ObcParameters.cpp
@@ -28,7 +28,7 @@

 #include "openmm/OpenMMException.h"
 #include "ObcParameters.h"
-#include "../SimTKUtilities/SimTKOpenMMCommon.h"
+#include "SimTKOpenMMCommon.h"

 using std::vector;


--- a/platforms/reference/tests/TestReferenceAndersenThermostat.cpp
+++ b/platforms/reference/tests/TestReferenceAndersenThermostat.cpp
@@ -40,7 +40,7 @@
 #include "openmm/NonbondedForce.h"
 #include "openmm/System.h"
 #include "openmm/VerletIntegrator.h"
-#include "../src/SimTKUtilities/SimTKOpenMMRealType.h"
+#include "SimTKOpenMMRealType.h"
 #include "sfmt/SFMT.h"
 #include <iostream>
 #include <vector>