Replaced several AMOEBA bonded forces with custom forces (#3046)

* Replaced several AMOEBA bonded forces with custom forces * Deleted obsolete AMOEBA forces * Replaced AmoebaPiTorsionForce with custom force

Replaced several AMOEBA bonded forces with custom forces (#3046)
* Replaced several AMOEBA bonded forces with custom forces * Deleted obsolete AMOEBA forces * Replaced AmoebaPiTorsionForce with custom force
1e42b8be · Peter Eastman · GitHub · 014797f4 · 014797f4 · 014797f4
Unverified Commit 1e42b8be authored Mar 04, 2021 by Peter Eastman Committed by GitHub Mar 04, 2021
20 changed files
--- a/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaOutOfPlaneBendForce.cpp
+++ b/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaOutOfPlaneBendForce.cpp
--- a/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaPiTorsionForce.cpp
+++ b/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaPiTorsionForce.cpp
--- a/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaStretchBendForce.cpp
+++ b/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaStretchBendForce.cpp
--- a/plugins/amoeba/serialization/include/openmm/serialization/AmoebaAngleForceProxy.h
+++ b/plugins/amoeba/serialization/include/openmm/serialization/AmoebaAngleForceProxy.h
--- a/plugins/amoeba/serialization/include/openmm/serialization/AmoebaBondForceProxy.h
+++ b/plugins/amoeba/serialization/include/openmm/serialization/AmoebaBondForceProxy.h
--- a/plugins/amoeba/serialization/include/openmm/serialization/AmoebaInPlaneAngleForceProxy.h
+++ b/plugins/amoeba/serialization/include/openmm/serialization/AmoebaInPlaneAngleForceProxy.h
--- a/plugins/amoeba/serialization/include/openmm/serialization/AmoebaOutOfPlaneBendForceProxy.h
+++ b/plugins/amoeba/serialization/include/openmm/serialization/AmoebaOutOfPlaneBendForceProxy.h
--- a/plugins/amoeba/serialization/include/openmm/serialization/AmoebaPiTorsionForceProxy.h
+++ b/plugins/amoeba/serialization/include/openmm/serialization/AmoebaPiTorsionForceProxy.h
--- a/plugins/amoeba/serialization/include/openmm/serialization/AmoebaStretchBendForceProxy.h
+++ b/plugins/amoeba/serialization/include/openmm/serialization/AmoebaStretchBendForceProxy.h
--- a/plugins/amoeba/serialization/src/AmoebaAngleForceProxy.cpp
+++ b/plugins/amoeba/serialization/src/AmoebaAngleForceProxy.cpp
--- a/plugins/amoeba/serialization/src/AmoebaBondForceProxy.cpp
+++ b/plugins/amoeba/serialization/src/AmoebaBondForceProxy.cpp
--- a/plugins/amoeba/serialization/src/AmoebaInPlaneAngleForceProxy.cpp
+++ b/plugins/amoeba/serialization/src/AmoebaInPlaneAngleForceProxy.cpp
--- a/plugins/amoeba/serialization/src/AmoebaOutOfPlaneBendForceProxy.cpp
+++ b/plugins/amoeba/serialization/src/AmoebaOutOfPlaneBendForceProxy.cpp
--- a/plugins/amoeba/serialization/src/AmoebaPiTorsionForceProxy.cpp
+++ b/plugins/amoeba/serialization/src/AmoebaPiTorsionForceProxy.cpp
--- a/plugins/amoeba/serialization/src/AmoebaSerializationProxyRegistration.cpp
+++ b/plugins/amoeba/serialization/src/AmoebaSerializationProxyRegistration.cpp
--- a/plugins/amoeba/serialization/src/AmoebaStretchBendForceProxy.cpp
+++ b/plugins/amoeba/serialization/src/AmoebaStretchBendForceProxy.cpp
--- a/plugins/amoeba/serialization/tests/TestSerializeAmoebaAngleForce.cpp
+++ b/plugins/amoeba/serialization/tests/TestSerializeAmoebaAngleForce.cpp
--- a/plugins/amoeba/serialization/tests/TestSerializeAmoebaBondForce.cpp
+++ b/plugins/amoeba/serialization/tests/TestSerializeAmoebaBondForce.cpp
--- a/plugins/amoeba/serialization/tests/TestSerializeAmoebaInPlaneAngleForce.cpp
+++ b/plugins/amoeba/serialization/tests/TestSerializeAmoebaInPlaneAngleForce.cpp
--- a/plugins/amoeba/serialization/tests/TestSerializeAmoebaOutOfPlaneBendForce.cpp
+++ b/plugins/amoeba/serialization/tests/TestSerializeAmoebaOutOfPlaneBendForce.cpp