Merge github.com:SimTk/openmm

19d2885a · Lee-Ping · 99ef4344 · 57a6768e · 19d2885a · 19d2885a
Commit 19d2885a authored Jan 23, 2014 by Lee-Ping
20 changed files
--- a/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferencePME.cpp
+++ b/platforms/reference/src/SimTKReference/ReferencePME.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp
--- a/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp
+++ b/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp
--- a/platforms/reference/tests/CMakeLists.txt
+++ b/platforms/reference/tests/CMakeLists.txt
--- a/platforms/reference/tests/TestReferenceCustomGBForce.cpp
+++ b/platforms/reference/tests/TestReferenceCustomGBForce.cpp
--- a/platforms/reference/tests/TestReferenceGBSAOBCForce.cpp
+++ b/platforms/reference/tests/TestReferenceGBSAOBCForce.cpp
--- a/plugins/amoeba/CMakeLists.txt
+++ b/plugins/amoeba/CMakeLists.txt
--- a/plugins/amoeba/openmmapi/include/openmm/AmoebaAngleForce.h
+++ b/plugins/amoeba/openmmapi/include/openmm/AmoebaAngleForce.h
--- a/plugins/amoeba/openmmapi/include/openmm/AmoebaBondForce.h
+++ b/plugins/amoeba/openmmapi/include/openmm/AmoebaBondForce.h
--- a/plugins/amoeba/openmmapi/include/openmm/AmoebaGeneralizedKirkwoodForce.h
+++ b/plugins/amoeba/openmmapi/include/openmm/AmoebaGeneralizedKirkwoodForce.h
--- a/plugins/amoeba/openmmapi/include/openmm/AmoebaInPlaneAngleForce.h
+++ b/plugins/amoeba/openmmapi/include/openmm/AmoebaInPlaneAngleForce.h
--- a/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h
+++ b/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h