Update run_monomer.sh

run_monomer.sh

 #!/bin/bash
-export DTKROOT=/opt/dtk-22.04.2
-export AMDGPU_TARGETS="gfx906"
-export ROCMVER=22.04.2
-export DTK_HOME=/opt/dtk-22.04.2
+export DTKROOT=/opt/dtk
+export AMDGPU_TARGETS="gfx928"
+export ROCMVER=24.04.2
+export DTK_HOME=/opt/dtk
 export ROCM_PATH=${DTK_HOME}
 export HIP_PATH=${DTK_HOME}/hip
 export PATH=${DTK_HOME}/bin:${DTK_HOME}/llvm/bin:${DTK_HOME}/hip/bin:${DTK_HOME}/miopen/bin:$PATH
@@ -11,16 +11,16 @@ export INCLUDE=${DTK_HOME}/include:${DTK_HOME}/hip/include:${DTK_HOME}/llvm/incl
 export C_INCLUDE_PATH=${DTK_HOME}/include:${DTK_HOME}/hip/include:${DTK_HOME}/llvm/include:$C_INCLUDE_PATH
 export CPLUS_INCLUDE_PATH=${DTK_HOME}/include:$CPLUS_INCLUDE_PATH
 export MIOPEN_SYSTEM_DB_PATH=${DTK_HOME}/miopen/share/miopen/db/
-source /root/env.sh
+source ./env.sh
 
-cd /root/Uni-Fold-main
-fasta_path=/root/Uni-Fold-main/data/T1024.fasta
-input_dir_base=/root/Uni-Fold-main/data
-output_dir_base=/root/Uni-Fold-main/data
-database_dir=/alphafold/alphafold/
+cd /root/Uni-Fold
+fasta_path=/root/Uni-Fold/data/T1024.fasta
+input_dir_base=/root/Uni-Fold/data
+output_dir_base=/root/Uni-Fold/data
+database_dir=/alphafold/
 max_template_date=2020-05-01
 model_name=model_2_ft
-param_path=/root/Uni-Fold-main/Alphafold/monomer.unifold.pt 
+param_path=/root/Uni-Fold/Alphafold/monomer.unifold.pt 
 
 echo "Starting homogeneous searching..."
 python unifold/homo_search.py \
@@ -41,7 +41,7 @@ python unifold/homo_search.py \
 echo "Starting prediction..."
 fasta_file=$(basename $fasta_path)
 target_name=${fasta_file%.fa*}
-export CUDA_VISIBLE_DEVICES=0,1,2,3
+
 python3 unifold/inference.py \
         --model_name=$model_name \
         --param_path=$param_path \