update uni-fold

a1c29028 · zhangqha · a1c29028 · a1c29028 · a1c29028 · a1c29028
Commit a1c29028 authored Apr 17, 2023 by zhangqha
20 changed files
--- a/unifold/losses/auxillary.py
+++ b/unifold/losses/auxillary.py
--- a/unifold/losses/chain_align.py
+++ b/unifold/losses/chain_align.py
--- a/unifold/losses/fape.py
+++ b/unifold/losses/fape.py
--- a/unifold/losses/geometry.py
+++ b/unifold/losses/geometry.py
--- a/unifold/losses/utils.py
+++ b/unifold/losses/utils.py
--- a/unifold/losses/violation.py
+++ b/unifold/losses/violation.py
--- a/unifold/model.py
+++ b/unifold/model.py
--- a/unifold/modules/__init__.py
+++ b/unifold/modules/__init__.py
--- a/unifold/modules/__pycache__/__init__.cpython-37.pyc
+++ b/unifold/modules/__pycache__/__init__.cpython-37.pyc
--- a/unifold/modules/__pycache__/alphafold.cpython-37.pyc
+++ b/unifold/modules/__pycache__/alphafold.cpython-37.pyc
--- a/unifold/modules/__pycache__/attentions.cpython-37.pyc
+++ b/unifold/modules/__pycache__/attentions.cpython-37.pyc
--- a/unifold/modules/__pycache__/auxillary_heads.cpython-37.pyc
+++ b/unifold/modules/__pycache__/auxillary_heads.cpython-37.pyc
--- a/unifold/modules/__pycache__/common.cpython-37.pyc
+++ b/unifold/modules/__pycache__/common.cpython-37.pyc
--- a/unifold/modules/__pycache__/confidence.cpython-37.pyc
+++ b/unifold/modules/__pycache__/confidence.cpython-37.pyc
--- a/unifold/modules/__pycache__/embedders.cpython-37.pyc
+++ b/unifold/modules/__pycache__/embedders.cpython-37.pyc
--- a/unifold/modules/__pycache__/evoformer.cpython-37.pyc
+++ b/unifold/modules/__pycache__/evoformer.cpython-37.pyc
--- a/unifold/modules/__pycache__/featurization.cpython-37.pyc
+++ b/unifold/modules/__pycache__/featurization.cpython-37.pyc
--- a/unifold/modules/__pycache__/frame.cpython-37.pyc
+++ b/unifold/modules/__pycache__/frame.cpython-37.pyc
--- a/unifold/modules/__pycache__/structure_module.cpython-37.pyc
+++ b/unifold/modules/__pycache__/structure_module.cpython-37.pyc
--- a/unifold/modules/__pycache__/template.cpython-37.pyc
+++ b/unifold/modules/__pycache__/template.cpython-37.pyc