Make it more clear the recommended way to update the standalone build.

.ci/nightly/update_windows/ONLY_RUN_THIS_IF_YOU_HAVE_TO/update_comfyui_and_python_dependencies.bat

+..\..\python_embeded\python.exe ..\update.py ..\..\ComfyUI\
+..\..\python_embeded\python.exe -s -m pip install --upgrade --pre torch torchvision torchaudio --extra-index-url https://download.pytorch.org/whl/cu118 -r ../../ComfyUI/requirements.txt pygit2
+pause

.ci/nightly/update_windows/update_all.bat

-..\python_embeded\python.exe .\update.py ..\ComfyUI\
-..\python_embeded\python.exe -s -m pip install --upgrade --pre torch torchvision torchaudio --extra-index-url https://download.pytorch.org/whl/cu118 -r ../ComfyUI/requirements.txt pygit2
-pause

.ci/nightly/windows_base_files/README_VERY_IMPORTANT.txt

@@ -19,8 +19,9 @@ You can download the stable diffusion 1.5 one from: https://huggingface.co/runwa
 
 
 RECOMMENDED WAY TO UPDATE:
-To update only the ComfyUI code: update\update_comfyui_only.bat
+To update the ComfyUI code: update\update_comfyui.bat
 
 
 
-To update ComfyUI with the python dependencies (ONLY USE IF YOU NEED TO UPDATE THE PYTHON PACKAGES): update\update_all.bat
+To update ComfyUI with the python dependencies:
+update\ONLY_RUN_THIS_IF_YOU_HAVE_TO\update_comfyui_and_python_dependencies.bat

.ci/setup_windows_zip.ps1

@@ -16,8 +16,8 @@ mv ComfyUI_copy ComfyUI_windows_portable/ComfyUI
 cd ComfyUI_windows_portable
 
 mkdir update
-cp ComfyUI/.ci/update_windows/* ./update/
-cp ComfyUI/.ci/windows_base_files/* ./
+cp -r ComfyUI/.ci/update_windows/* ./update/
+cp -r ComfyUI/.ci/windows_base_files/* ./
 
 cd ..
 

.ci/setup_windows_zip_nightly_pytorch.ps1

@@ -18,8 +18,8 @@ mv ComfyUI_copy ComfyUI_windows_portable_nightly_pytorch/ComfyUI
 cd ComfyUI_windows_portable_nightly_pytorch
 
 mkdir update
-cp ComfyUI/.ci/nightly/update_windows/* ./update/
-cp ComfyUI/.ci/nightly/windows_base_files/* ./
+cp -r ComfyUI/.ci/nightly/update_windows/* ./update/
+cp -r ComfyUI/.ci/nightly/windows_base_files/* ./
 
 cd ..
 

.ci/update_windows/ONLY_RUN_THIS_IF_YOU_HAVE_TO/update_comfyui_and_python_dependencies.bat

+..\..\python_embeded\python.exe ..\update.py ..\..\ComfyUI\
+..\..\python_embeded\python.exe -s -m pip install --upgrade torch torchvision torchaudio --extra-index-url https://download.pytorch.org/whl/cu117 xformers -r ../../ComfyUI/requirements.txt pygit2
+pause

.ci/update_windows/update_all.bat

-..\python_embeded\python.exe .\update.py ..\ComfyUI\
-..\python_embeded\python.exe -s -m pip install --upgrade torch torchvision torchaudio --extra-index-url https://download.pytorch.org/whl/cu117 xformers -r ../ComfyUI/requirements.txt pygit2
-pause

.ci/windows_base_files/README_VERY_IMPORTANT.txt

@@ -18,8 +18,10 @@ You can download the stable diffusion 1.5 one from: https://huggingface.co/runwa
 
 
 RECOMMENDED WAY TO UPDATE:
-To update only the ComfyUI code: update\update_comfyui_only.bat
+To update the ComfyUI code: update\update_comfyui.bat
 
 
 
-To update ComfyUI with the python dependencies (ONLY USE IF YOU NEED TO UPDATE THE PYTHON PACKAGES): update\update_all.bat
+To update ComfyUI with the python dependencies:
+update\ONLY_RUN_THIS_IF_YOU_HAVE_TO\update_comfyui_and_python_dependencies.bat
+