import torch import torchani import unittest import os import pickle path = os.path.dirname(os.path.realpath(__file__)) N = 97 class TestEnergies(unittest.TestCase): def setUp(self, dtype=torchani.default_dtype, device=torchani.default_device): self.tolerance = 5e-5 aev_computer = torchani.SortedAEV( dtype=dtype, device=torch.device('cpu')) prepare = torchani.PrepareInput(aev_computer.species, aev_computer.device) nnp = torchani.models.NeuroChemNNP(aev_computer.species) self.model = torch.nn.Sequential(prepare, aev_computer, nnp) def _test_molecule(self, coordinates, species, energies): shift_energy = torchani.EnergyShifter(torchani.buildin_sae_file) energies_ = self.model((species, coordinates)).squeeze() energies_ = shift_energy.add_sae(energies_, species) max_diff = (energies - energies_).abs().max().item() self.assertLess(max_diff, self.tolerance) def testGDB(self): for i in range(N): datafile = os.path.join(path, 'test_data/{}'.format(i)) with open(datafile, 'rb') as f: coordinates, species, _, _, energies, _ = pickle.load(f) self._test_molecule(coordinates, species, energies) if __name__ == '__main__': unittest.main()