Skip to content
GitLab
Menu
Projects
Groups
Snippets
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
OpenDAS
torchani
Commits
7c597a39
Unverified
Commit
7c597a39
authored
Sep 09, 2018
by
Gao, Xiang
Committed by
GitHub
Sep 09, 2018
Browse files
Make AEVCacheLoader a Dataset (#93)
parent
83107add
Changes
1
Show whitespace changes
Inline
Side-by-side
Showing
1 changed file
with
3 additions
and
4 deletions
+3
-4
torchani/data/__init__.py
torchani/data/__init__.py
+3
-4
No files found.
torchani/data/__init__.py
View file @
7c597a39
...
...
@@ -219,7 +219,7 @@ class BatchedANIDataset(Dataset):
return
len
(
self
.
batches
)
class
AEVCacheLoader
:
class
AEVCacheLoader
(
Dataset
)
:
"""Build a factory for AEV.
The computation of AEV is the most time consuming part during training.
...
...
@@ -233,6 +233,7 @@ class AEVCacheLoader:
"""
def
__init__
(
self
,
disk_cache
=
None
):
super
(
AEVCacheLoader
,
self
).
__init__
()
self
.
disk_cache
=
disk_cache
# load dataset from disk cache
...
...
@@ -241,12 +242,10 @@ class AEVCacheLoader:
self
.
dataset
=
pickle
.
load
(
f
)
def
__getitem__
(
self
,
index
):
if
index
>=
self
.
__len__
():
raise
IndexError
()
_
,
output
=
self
.
dataset
.
batches
[
index
]
aev_path
=
os
.
path
.
join
(
self
.
disk_cache
,
str
(
index
))
with
open
(
aev_path
,
'rb'
)
as
f
:
species_aevs
=
pickle
.
load
(
f
)
_
,
output
=
self
.
dataset
.
batches
[
index
]
return
species_aevs
,
output
def
__len__
(
self
):
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment