[CI] Update lint dependencies and fix lint on trunk (#1433)

* [CI] Update pre-commit hooks

* [Lint] Pass correct `exclude-header-filter` to `clang-tidy`

* [Lint] Download latest `run-clang-tidy` script

* [CI] Show compile commands

* [CI] Add output grouping to GHA

* [Lint] Re-order pre-commit hooks

.clang-tidy

@@ -4,7 +4,9 @@ ExtraArgs: []
 FormatStyle: file
 UseColor: true
 WarningsAsErrors: '*'
+# FIXME: Use `ExcludeHeaderFilterRegex` instead when all maintainers upgraded their `clang-tidy`
 HeaderFilterRegex: '^(?!.*(?:/|^)(3rdparty|tvm)/).*'
+# ExcludeHeaderFilterRegex: '^(3rdparty|tvm)/.*$'
 
 # NOTE: there must be no spaces before the '-', so put the comma last.
 Checks: >-

.github/workflows/ci.yml

@@ -294,29 +294,33 @@ jobs:
         run: |
           echo "\$ $(command -v clang-tidy) --version" && clang-tidy --version
 
-          if [[ -x "$(command -v run-clang-tidy)" ]]; then
-            echo "Using run-clang-tidy from $(command -v run-clang-tidy)"
-            CLANG_TIDY=(run-clang-tidy)
-          else
+          # Download run-clang-tidy script
           RCT_URL=https://raw.githubusercontent.com/llvm/llvm-project/refs/heads/release/21.x/clang-tools-extra/clang-tidy/tool/run-clang-tidy.py
           echo "Downloading run-clang-tidy script from ${RCT_URL}"
           echo "import urllib.request; url = '${RCT_URL}'.rstrip('/'); urllib.request.urlretrieve(url, url.split('/')[-1])" | uv run --no-project --script -
-            CLANG_TIDY=(uv run --no-project --script -- run-clang-tidy.py)
-          fi
+          RUN_CLANG_TIDY=(uv run --no-project --script -- run-clang-tidy.py)
+
           if [[ -x "$(command -v clang-apply-replacements)" ]]; then
             echo "Using clang-apply-replacements from $(command -v clang-apply-replacements)"
-            CLANG_TIDY+=(-fix -clang-apply-replacements-binary="$(command -v clang-apply-replacements)")
+            RUN_CLANG_TIDY+=(-fix -clang-apply-replacements-binary="$(command -v clang-apply-replacements)")
           else
             echo "::warning::clang-apply-replacements not found in PATH, automatic fixing disabled."
           fi
 
           # Run cmake to create the build directory with compile_commands.json
           cmake -S . -B cmake-build --fresh ${CLANG_TIDY_CMAKE_OPTIONS}  # no quotes here
+          echo "::group::compile_commands.json"
+          ls -alh cmake-build/compile_commands.json
+          uv run --no-project -m -- json.tool --no-ensure-ascii cmake-build/compile_commands.json
+          echo "::endgroup::"
 
           CXX_FILES=$(find src -type f -iname "*.[ch]pp" -o -iname "*.cc" -o -iname "*.c" -o -iname "*.h")
           rc=0
-          "${CLANG_TIDY[@]}" -clang-tidy-binary="$(command -v clang-tidy)" \
+          echo "::group::run-clang-tidy"
+          "${RUN_CLANG_TIDY[@]}" -clang-tidy-binary="$(command -v clang-tidy)" \
+            -exclude-header-filter='^(3rdparty|tvm)/.*$' \
             -p="cmake-build" ${CXX_FILES} || rc="$?"
+          echo "::endgroup::"
           rm -rf cmake-build run-clang-tidy.py
           if (( rc != 0 )); then
             echo "::error::clang-tidy found issues (exit code: ${rc}). Please run 'clang-tidy --fix' locally to fix them."

.gitignore

@@ -117,3 +117,6 @@ maint/host_checks/logs/*
 
 # csv
 *.csv
+
+# clang-tidy
+/run-clang-tidy.py

.pre-commit-config.yaml

@@ -32,16 +32,17 @@ repos:
         args: [--ignore-case]
         files: ^docs/spelling_wordlist\.txt$
   - repo: https://github.com/pre-commit/mirrors-clang-format
-    rev: v21.1.6  # sync with requirements-lint.txt
+    rev: v21.1.7  # sync with requirements-lint.txt
     hooks:
       - id: clang-format
         types_or: [c++, c]
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.14.7  # sync with requirements-lint.txt
+    rev: v0.14.9  # sync with requirements-lint.txt
     hooks:
-      - id: ruff-format
       - id: ruff-check
         args: [--fix, --exit-non-zero-on-fix]
+      - id: ruff-format
+        args: [--exit-non-zero-on-format]
   - repo: https://github.com/codespell-project/codespell
     rev: v2.4.1  # sync with requirements-lint.txt
     hooks:

requirements-lint.txt

 # Format and lint requirements
 pre-commit
-clang-format==21.1.2
-clang-tidy==21.1.1
+clang-format==21.1.7
+clang-tidy==21.1.6
 codespell[toml]==2.4.1
-ruff==0.14.3
+ruff==0.14.9