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Commit da2c1226 authored by lucasb-eyer's avatar lucasb-eyer
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Initial import of code.

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densecrf/include/Eigen/Cholesky 0 → 100644
View file @ da2c1226
#ifndef EIGEN_CHOLESKY_MODULE_H
#define EIGEN_CHOLESKY_MODULE_H
#include "Core"
#include "src/Core/util/DisableStupidWarnings.h"
/** \defgroup Cholesky_Module Cholesky module
*
*
*
* This module provides two variants of the Cholesky decomposition for selfadjoint (hermitian) matrices.
* Those decompositions are accessible via the following MatrixBase methods:
* - MatrixBase::llt(),
* - MatrixBase::ldlt()
*
* \code
* #include <Eigen/Cholesky>
* \endcode
*/
#include "src/misc/Solve.h"
#include "src/Cholesky/LLT.h"
#include "src/Cholesky/LDLT.h"
#ifdef EIGEN_USE_LAPACKE
#include "src/Cholesky/LLT_MKL.h"
#endif
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_CHOLESKY_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/CholmodSupport 0 → 100644
View file @ da2c1226
#ifndef EIGEN_CHOLMODSUPPORT_MODULE_H
#define EIGEN_CHOLMODSUPPORT_MODULE_H
#include "SparseCore"
#include "src/Core/util/DisableStupidWarnings.h"
extern "C" {
#include <cholmod.h>
}
/** \ingroup Support_modules
* \defgroup CholmodSupport_Module CholmodSupport module
*
* This module provides an interface to the Cholmod library which is part of the <a href="http://www.cise.ufl.edu/research/sparse/SuiteSparse/">suitesparse</a> package.
* It provides the two following main factorization classes:
* - class CholmodSupernodalLLT: a supernodal LLT Cholesky factorization.
* - class CholmodDecomposiiton: a general L(D)LT Cholesky factorization with automatic or explicit runtime selection of the underlying factorization method (supernodal or simplicial).
*
* For the sake of completeness, this module also propose the two following classes:
* - class CholmodSimplicialLLT
* - class CholmodSimplicialLDLT
* Note that these classes does not bring any particular advantage compared to the built-in
* SimplicialLLT and SimplicialLDLT factorization classes.
*
* \code
* #include <Eigen/CholmodSupport>
* \endcode
*
* In order to use this module, the cholmod headers must be accessible from the include paths, and your binary must be linked to the cholmod library and its dependencies.
* The dependencies depend on how cholmod has been compiled.
* For a cmake based project, you can use our FindCholmod.cmake module to help you in this task.
*
*/
#include "src/misc/Solve.h"
#include "src/misc/SparseSolve.h"
#include "src/CholmodSupport/CholmodSupport.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_CHOLMODSUPPORT_MODULE_H
densecrf/include/Eigen/Core 0 → 100644
View file @ da2c1226
// This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2007-2011 Benoit Jacob <jacob.benoit.1@gmail.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
#ifndef EIGEN_CORE_H
#define EIGEN_CORE_H
// first thing Eigen does: stop the compiler from committing suicide
#include "src/Core/util/DisableStupidWarnings.h"
// then include this file where all our macros are defined. It's really important to do it first because
// it's where we do all the alignment settings (platform detection and honoring the user's will if he
// defined e.g. EIGEN_DONT_ALIGN) so it needs to be done before we do anything with vectorization.
#include "src/Core/util/Macros.h"
#include <complex>
// this include file manages BLAS and MKL related macros
// and inclusion of their respective header files
#include "src/Core/util/MKL_support.h"
// if alignment is disabled, then disable vectorization. Note: EIGEN_ALIGN is the proper check, it takes into
// account both the user's will (EIGEN_DONT_ALIGN) and our own platform checks
#if !EIGEN_ALIGN
#ifndef EIGEN_DONT_VECTORIZE
#define EIGEN_DONT_VECTORIZE
#endif
#endif
#ifdef _MSC_VER
#include <malloc.h> // for _aligned_malloc -- need it regardless of whether vectorization is enabled
#if (_MSC_VER >= 1500) // 2008 or later
// Remember that usage of defined() in a #define is undefined by the standard.
// a user reported that in 64-bit mode, MSVC doesn't care to define _M_IX86_FP.
#if (defined(_M_IX86_FP) && (_M_IX86_FP >= 2)) || defined(_M_X64)
#define EIGEN_SSE2_ON_MSVC_2008_OR_LATER
#endif
#endif
#else
// Remember that usage of defined() in a #define is undefined by the standard
#if (defined __SSE2__) && ( (!defined __GNUC__) || (defined __INTEL_COMPILER) || EIGEN_GNUC_AT_LEAST(4,2) )
#define EIGEN_SSE2_ON_NON_MSVC_BUT_NOT_OLD_GCC
#endif
#endif
#ifndef EIGEN_DONT_VECTORIZE
#if defined (EIGEN_SSE2_ON_NON_MSVC_BUT_NOT_OLD_GCC) || defined(EIGEN_SSE2_ON_MSVC_2008_OR_LATER)
// Defines symbols for compile-time detection of which instructions are
// used.
// EIGEN_VECTORIZE_YY is defined if and only if the instruction set YY is used
#define EIGEN_VECTORIZE
#define EIGEN_VECTORIZE_SSE
#define EIGEN_VECTORIZE_SSE2
// Detect sse3/ssse3/sse4:
// gcc and icc defines __SSE3__, ...
// there is no way to know about this on msvc. You can define EIGEN_VECTORIZE_SSE* if you
// want to force the use of those instructions with msvc.
#ifdef __SSE3__
#define EIGEN_VECTORIZE_SSE3
#endif
#ifdef __SSSE3__
#define EIGEN_VECTORIZE_SSSE3
#endif
#ifdef __SSE4_1__
#define EIGEN_VECTORIZE_SSE4_1
#endif
#ifdef __SSE4_2__
#define EIGEN_VECTORIZE_SSE4_2
#endif
// include files
// This extern "C" works around a MINGW-w64 compilation issue
// https://sourceforge.net/tracker/index.php?func=detail&aid=3018394&group_id=202880&atid=983354
// In essence, intrin.h is included by windows.h and also declares intrinsics (just as emmintrin.h etc. below do).
// However, intrin.h uses an extern "C" declaration, and g++ thus complains of duplicate declarations
// with conflicting linkage. The linkage for intrinsics doesn't matter, but at that stage the compiler doesn't know;
// so, to avoid compile errors when windows.h is included after Eigen/Core, ensure intrinsics are extern "C" here too.
// notice that since these are C headers, the extern "C" is theoretically needed anyways.
extern "C" {
#include <emmintrin.h>
#include <xmmintrin.h>
#ifdef EIGEN_VECTORIZE_SSE3
#include <pmmintrin.h>
#endif
#ifdef EIGEN_VECTORIZE_SSSE3
#include <tmmintrin.h>
#endif
#ifdef EIGEN_VECTORIZE_SSE4_1
#include <smmintrin.h>
#endif
#ifdef EIGEN_VECTORIZE_SSE4_2
#include <nmmintrin.h>
#endif
} // end extern "C"
#elif defined __ALTIVEC__
#define EIGEN_VECTORIZE
#define EIGEN_VECTORIZE_ALTIVEC
#include <altivec.h>
// We need to #undef all these ugly tokens defined in <altivec.h>
// => use __vector instead of vector
#undef bool
#undef vector
#undef pixel
#elif defined __ARM_NEON__
#define EIGEN_VECTORIZE
#define EIGEN_VECTORIZE_NEON
#include <arm_neon.h>
#endif
#endif
#if (defined _OPENMP) && (!defined EIGEN_DONT_PARALLELIZE)
#define EIGEN_HAS_OPENMP
#endif
#ifdef EIGEN_HAS_OPENMP
#include <omp.h>
#endif
// MSVC for windows mobile does not have the errno.h file
#if !(defined(_MSC_VER) && defined(_WIN32_WCE)) && !defined(__ARMCC_VERSION)
#define EIGEN_HAS_ERRNO
#endif
#ifdef EIGEN_HAS_ERRNO
#include <cerrno>
#endif
#include <cstddef>
#include <cstdlib>
#include <cmath>
#include <cassert>
#include <functional>
#include <iosfwd>
#include <cstring>
#include <string>
#include <limits>
#include <climits> // for CHAR_BIT
// for min/max:
#include <algorithm>
// for outputting debug info
#ifdef EIGEN_DEBUG_ASSIGN
#include <iostream>
#endif
// required for __cpuid, needs to be included after cmath
#if defined(_MSC_VER) && (defined(_M_IX86)||defined(_M_X64))
#include <intrin.h>
#endif
#if defined(_CPPUNWIND) || defined(__EXCEPTIONS)
#define EIGEN_EXCEPTIONS
#endif
#ifdef EIGEN_EXCEPTIONS
#include <new>
#endif
/** \brief Namespace containing all symbols from the %Eigen library. */
namespace Eigen {
inline static const char *SimdInstructionSetsInUse(void) {
#if defined(EIGEN_VECTORIZE_SSE4_2)
return "SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2";
#elif defined(EIGEN_VECTORIZE_SSE4_1)
return "SSE, SSE2, SSE3, SSSE3, SSE4.1";
#elif defined(EIGEN_VECTORIZE_SSSE3)
return "SSE, SSE2, SSE3, SSSE3";
#elif defined(EIGEN_VECTORIZE_SSE3)
return "SSE, SSE2, SSE3";
#elif defined(EIGEN_VECTORIZE_SSE2)
return "SSE, SSE2";
#elif defined(EIGEN_VECTORIZE_ALTIVEC)
return "AltiVec";
#elif defined(EIGEN_VECTORIZE_NEON)
return "ARM NEON";
#else
return "None";
#endif
}
} // end namespace Eigen
#define STAGE10_FULL_EIGEN2_API 10
#define STAGE20_RESOLVE_API_CONFLICTS 20
#define STAGE30_FULL_EIGEN3_API 30
#define STAGE40_FULL_EIGEN3_STRICTNESS 40
#define STAGE99_NO_EIGEN2_SUPPORT 99
#if defined EIGEN2_SUPPORT_STAGE40_FULL_EIGEN3_STRICTNESS
#define EIGEN2_SUPPORT
#define EIGEN2_SUPPORT_STAGE STAGE40_FULL_EIGEN3_STRICTNESS
#elif defined EIGEN2_SUPPORT_STAGE30_FULL_EIGEN3_API
#define EIGEN2_SUPPORT
#define EIGEN2_SUPPORT_STAGE STAGE30_FULL_EIGEN3_API
#elif defined EIGEN2_SUPPORT_STAGE20_RESOLVE_API_CONFLICTS
#define EIGEN2_SUPPORT
#define EIGEN2_SUPPORT_STAGE STAGE20_RESOLVE_API_CONFLICTS
#elif defined EIGEN2_SUPPORT_STAGE10_FULL_EIGEN2_API
#define EIGEN2_SUPPORT
#define EIGEN2_SUPPORT_STAGE STAGE10_FULL_EIGEN2_API
#elif defined EIGEN2_SUPPORT
// default to stage 3, that's what it's always meant
#define EIGEN2_SUPPORT_STAGE30_FULL_EIGEN3_API
#define EIGEN2_SUPPORT_STAGE STAGE30_FULL_EIGEN3_API
#else
#define EIGEN2_SUPPORT_STAGE STAGE99_NO_EIGEN2_SUPPORT
#endif
#ifdef EIGEN2_SUPPORT
#undef minor
#endif
// we use size_t frequently and we'll never remember to prepend it with std:: everytime just to
// ensure QNX/QCC support
using std::size_t;
// gcc 4.6.0 wants std:: for ptrdiff_t
using std::ptrdiff_t;
/** \defgroup Core_Module Core module
* This is the main module of Eigen providing dense matrix and vector support
* (both fixed and dynamic size) with all the features corresponding to a BLAS library
* and much more...
*
* \code
* #include <Eigen/Core>
* \endcode
*/
/** \defgroup Support_modules Support modules [category]
* Category of modules which add support for external libraries.
*/
#include "src/Core/util/Constants.h"
#include "src/Core/util/ForwardDeclarations.h"
#include "src/Core/util/Meta.h"
#include "src/Core/util/XprHelper.h"
#include "src/Core/util/StaticAssert.h"
#include "src/Core/util/Memory.h"
#include "src/Core/NumTraits.h"
#include "src/Core/MathFunctions.h"
#include "src/Core/GenericPacketMath.h"
#if defined EIGEN_VECTORIZE_SSE
#include "src/Core/arch/SSE/PacketMath.h"
#include "src/Core/arch/SSE/MathFunctions.h"
#include "src/Core/arch/SSE/Complex.h"
#elif defined EIGEN_VECTORIZE_ALTIVEC
#include "src/Core/arch/AltiVec/PacketMath.h"
#include "src/Core/arch/AltiVec/Complex.h"
#elif defined EIGEN_VECTORIZE_NEON
#include "src/Core/arch/NEON/PacketMath.h"
#include "src/Core/arch/NEON/Complex.h"
#endif
#include "src/Core/arch/Default/Settings.h"
#include "src/Core/Functors.h"
#include "src/Core/DenseCoeffsBase.h"
#include "src/Core/DenseBase.h"
#include "src/Core/MatrixBase.h"
#include "src/Core/EigenBase.h"
#ifndef EIGEN_PARSED_BY_DOXYGEN // work around Doxygen bug triggered by Assign.h r814874
// at least confirmed with Doxygen 1.5.5 and 1.5.6
#include "src/Core/Assign.h"
#endif
#include "src/Core/util/BlasUtil.h"
#include "src/Core/DenseStorage.h"
#include "src/Core/NestByValue.h"
#include "src/Core/ForceAlignedAccess.h"
#include "src/Core/ReturnByValue.h"
#include "src/Core/NoAlias.h"
#include "src/Core/PlainObjectBase.h"
#include "src/Core/Matrix.h"
#include "src/Core/Array.h"
#include "src/Core/CwiseBinaryOp.h"
#include "src/Core/CwiseUnaryOp.h"
#include "src/Core/CwiseNullaryOp.h"
#include "src/Core/CwiseUnaryView.h"
#include "src/Core/SelfCwiseBinaryOp.h"
#include "src/Core/Dot.h"
#include "src/Core/StableNorm.h"
#include "src/Core/MapBase.h"
#include "src/Core/Stride.h"
#include "src/Core/Map.h"
#include "src/Core/Block.h"
#include "src/Core/VectorBlock.h"
#include "src/Core/Transpose.h"
#include "src/Core/DiagonalMatrix.h"
#include "src/Core/Diagonal.h"
#include "src/Core/DiagonalProduct.h"
#include "src/Core/PermutationMatrix.h"
#include "src/Core/Transpositions.h"
#include "src/Core/Redux.h"
#include "src/Core/Visitor.h"
#include "src/Core/Fuzzy.h"
#include "src/Core/IO.h"
#include "src/Core/Swap.h"
#include "src/Core/CommaInitializer.h"
#include "src/Core/Flagged.h"
#include "src/Core/ProductBase.h"
#include "src/Core/GeneralProduct.h"
#include "src/Core/TriangularMatrix.h"
#include "src/Core/SelfAdjointView.h"
#include "src/Core/products/GeneralBlockPanelKernel.h"
#include "src/Core/products/Parallelizer.h"
#include "src/Core/products/CoeffBasedProduct.h"
#include "src/Core/products/GeneralMatrixVector.h"
#include "src/Core/products/GeneralMatrixMatrix.h"
#include "src/Core/SolveTriangular.h"
#include "src/Core/products/GeneralMatrixMatrixTriangular.h"
#include "src/Core/products/SelfadjointMatrixVector.h"
#include "src/Core/products/SelfadjointMatrixMatrix.h"
#include "src/Core/products/SelfadjointProduct.h"
#include "src/Core/products/SelfadjointRank2Update.h"
#include "src/Core/products/TriangularMatrixVector.h"
#include "src/Core/products/TriangularMatrixMatrix.h"
#include "src/Core/products/TriangularSolverMatrix.h"
#include "src/Core/products/TriangularSolverVector.h"
#include "src/Core/BandMatrix.h"
#include "src/Core/BooleanRedux.h"
#include "src/Core/Select.h"
#include "src/Core/VectorwiseOp.h"
#include "src/Core/Random.h"
#include "src/Core/Replicate.h"
#include "src/Core/Reverse.h"
#include "src/Core/ArrayBase.h"
#include "src/Core/ArrayWrapper.h"
#ifdef EIGEN_USE_BLAS
#include "src/Core/products/GeneralMatrixMatrix_MKL.h"
#include "src/Core/products/GeneralMatrixVector_MKL.h"
#include "src/Core/products/GeneralMatrixMatrixTriangular_MKL.h"
#include "src/Core/products/SelfadjointMatrixMatrix_MKL.h"
#include "src/Core/products/SelfadjointMatrixVector_MKL.h"
#include "src/Core/products/TriangularMatrixMatrix_MKL.h"
#include "src/Core/products/TriangularMatrixVector_MKL.h"
#include "src/Core/products/TriangularSolverMatrix_MKL.h"
#endif // EIGEN_USE_BLAS
#ifdef EIGEN_USE_MKL_VML
#include "src/Core/Assign_MKL.h"
#endif
#include "src/Core/GlobalFunctions.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#ifdef EIGEN2_SUPPORT
#include "Eigen2Support"
#endif
#endif // EIGEN_CORE_H
densecrf/include/Eigen/Dense 0 → 100644
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#include "Core"
#include "LU"
#include "Cholesky"
#include "QR"
#include "SVD"
#include "Geometry"
#include "Eigenvalues"
densecrf/include/Eigen/Eigen 0 → 100644
View file @ da2c1226
#include "Dense"
//#include "Sparse"
densecrf/include/Eigen/Eigen2Support 0 → 100644
View file @ da2c1226
// This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
#ifndef EIGEN2SUPPORT_H
#define EIGEN2SUPPORT_H
#if (!defined(EIGEN2_SUPPORT)) || (!defined(EIGEN_CORE_H))
#error Eigen2 support must be enabled by defining EIGEN2_SUPPORT before including any Eigen header
#endif
#include "src/Core/util/DisableStupidWarnings.h"
/** \ingroup Support_modules
* \defgroup Eigen2Support_Module Eigen2 support module
* This module provides a couple of deprecated functions improving the compatibility with Eigen2.
*
* To use it, define EIGEN2_SUPPORT before including any Eigen header
* \code
* #define EIGEN2_SUPPORT
* \endcode
*
*/
#include "src/Eigen2Support/Macros.h"
#include "src/Eigen2Support/Memory.h"
#include "src/Eigen2Support/Meta.h"
#include "src/Eigen2Support/Lazy.h"
#include "src/Eigen2Support/Cwise.h"
#include "src/Eigen2Support/CwiseOperators.h"
#include "src/Eigen2Support/TriangularSolver.h"
#include "src/Eigen2Support/Block.h"
#include "src/Eigen2Support/VectorBlock.h"
#include "src/Eigen2Support/Minor.h"
#include "src/Eigen2Support/MathFunctions.h"
#include "src/Core/util/ReenableStupidWarnings.h"
// Eigen2 used to include iostream
#include<iostream>
#define EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE_AND_SIZE(TypeSuffix, SizeSuffix) \
using Eigen::Matrix##SizeSuffix##TypeSuffix; \
using Eigen::Vector##SizeSuffix##TypeSuffix; \
using Eigen::RowVector##SizeSuffix##TypeSuffix;
#define EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE(TypeSuffix) \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE_AND_SIZE(TypeSuffix, 2) \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE_AND_SIZE(TypeSuffix, 3) \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE_AND_SIZE(TypeSuffix, 4) \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE_AND_SIZE(TypeSuffix, X) \
#define EIGEN_USING_MATRIX_TYPEDEFS \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE(i) \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE(f) \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE(d) \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE(cf) \
EIGEN_USING_MATRIX_TYPEDEFS_FOR_TYPE(cd)
#define USING_PART_OF_NAMESPACE_EIGEN \
EIGEN_USING_MATRIX_TYPEDEFS \
using Eigen::Matrix; \
using Eigen::MatrixBase; \
using Eigen::ei_random; \
using Eigen::ei_real; \
using Eigen::ei_imag; \
using Eigen::ei_conj; \
using Eigen::ei_abs; \
using Eigen::ei_abs2; \
using Eigen::ei_sqrt; \
using Eigen::ei_exp; \
using Eigen::ei_log; \
using Eigen::ei_sin; \
using Eigen::ei_cos;
#endif // EIGEN2SUPPORT_H
densecrf/include/Eigen/Eigenvalues 0 → 100644
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#ifndef EIGEN_EIGENVALUES_MODULE_H
#define EIGEN_EIGENVALUES_MODULE_H
#include "Core"
#include "src/Core/util/DisableStupidWarnings.h"
#include "Cholesky"
#include "Jacobi"
#include "Householder"
#include "LU"
#include "Geometry"
/** \defgroup Eigenvalues_Module Eigenvalues module
*
*
*
* This module mainly provides various eigenvalue solvers.
* This module also provides some MatrixBase methods, including:
* - MatrixBase::eigenvalues(),
* - MatrixBase::operatorNorm()
*
* \code
* #include <Eigen/Eigenvalues>
* \endcode
*/
#include "src/Eigenvalues/Tridiagonalization.h"
#include "src/Eigenvalues/RealSchur.h"
#include "src/Eigenvalues/EigenSolver.h"
#include "src/Eigenvalues/SelfAdjointEigenSolver.h"
#include "src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h"
#include "src/Eigenvalues/HessenbergDecomposition.h"
#include "src/Eigenvalues/ComplexSchur.h"
#include "src/Eigenvalues/ComplexEigenSolver.h"
#include "src/Eigenvalues/MatrixBaseEigenvalues.h"
#ifdef EIGEN_USE_LAPACKE
#include "src/Eigenvalues/RealSchur_MKL.h"
#include "src/Eigenvalues/ComplexSchur_MKL.h"
#include "src/Eigenvalues/SelfAdjointEigenSolver_MKL.h"
#endif
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_EIGENVALUES_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/Geometry 0 → 100644
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#ifndef EIGEN_GEOMETRY_MODULE_H
#define EIGEN_GEOMETRY_MODULE_H
#include "Core"
#include "src/Core/util/DisableStupidWarnings.h"
#include "SVD"
#include "LU"
#include <limits>
#ifndef M_PI
#define M_PI 3.14159265358979323846
#endif
/** \defgroup Geometry_Module Geometry module
*
*
*
* This module provides support for:
* - fixed-size homogeneous transformations
* - translation, scaling, 2D and 3D rotations
* - quaternions
* - \ref MatrixBase::cross() "cross product"
* - \ref MatrixBase::unitOrthogonal() "orthognal vector generation"
* - some linear components: parametrized-lines and hyperplanes
*
* \code
* #include <Eigen/Geometry>
* \endcode
*/
#include "src/Geometry/OrthoMethods.h"
#include "src/Geometry/EulerAngles.h"
#if EIGEN2_SUPPORT_STAGE > STAGE20_RESOLVE_API_CONFLICTS
#include "src/Geometry/Homogeneous.h"
#include "src/Geometry/RotationBase.h"
#include "src/Geometry/Rotation2D.h"
#include "src/Geometry/Quaternion.h"
#include "src/Geometry/AngleAxis.h"
#include "src/Geometry/Transform.h"
#include "src/Geometry/Translation.h"
#include "src/Geometry/Scaling.h"
#include "src/Geometry/Hyperplane.h"
#include "src/Geometry/ParametrizedLine.h"
#include "src/Geometry/AlignedBox.h"
#include "src/Geometry/Umeyama.h"
#if defined EIGEN_VECTORIZE_SSE
#include "src/Geometry/arch/Geometry_SSE.h"
#endif
#endif
#ifdef EIGEN2_SUPPORT
#include "src/Eigen2Support/Geometry/All.h"
#endif
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_GEOMETRY_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/Householder 0 → 100644
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#ifndef EIGEN_HOUSEHOLDER_MODULE_H
#define EIGEN_HOUSEHOLDER_MODULE_H
#include "Core"
#include "src/Core/util/DisableStupidWarnings.h"
/** \defgroup Householder_Module Householder module
* This module provides Householder transformations.
*
* \code
* #include <Eigen/Householder>
* \endcode
*/
#include "src/Householder/Householder.h"
#include "src/Householder/HouseholderSequence.h"
#include "src/Householder/BlockHouseholder.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_HOUSEHOLDER_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/IterativeLinearSolvers 0 → 100644
View file @ da2c1226
#ifndef EIGEN_ITERATIVELINEARSOLVERS_MODULE_H
#define EIGEN_ITERATIVELINEARSOLVERS_MODULE_H
#include "SparseCore"
#include "OrderingMethods"
#include "src/Core/util/DisableStupidWarnings.h"
/** \ingroup Sparse_modules
* \defgroup IterativeLinearSolvers_Module IterativeLinearSolvers module
*
* This module currently provides iterative methods to solve problems of the form \c A \c x = \c b, where \c A is a squared matrix, usually very large and sparse.
* Those solvers are accessible via the following classes:
* - ConjugateGradient for selfadjoint (hermitian) matrices,
* - BiCGSTAB for general square matrices.
*
* These iterative solvers are associated with some preconditioners:
* - IdentityPreconditioner - not really useful
* - DiagonalPreconditioner - also called JAcobi preconditioner, work very well on diagonal dominant matrices.
* - IncompleteILUT - incomplete LU factorization with dual thresholding
*
* Such problems can also be solved using the direct sparse decomposition modules: SparseCholesky, CholmodSupport, UmfPackSupport, SuperLUSupport.
*
* \code
* #include <Eigen/IterativeLinearSolvers>
* \endcode
*/
#include "src/misc/Solve.h"
#include "src/misc/SparseSolve.h"
#include "src/IterativeLinearSolvers/IterativeSolverBase.h"
#include "src/IterativeLinearSolvers/BasicPreconditioners.h"
#include "src/IterativeLinearSolvers/ConjugateGradient.h"
#include "src/IterativeLinearSolvers/BiCGSTAB.h"
#include "src/IterativeLinearSolvers/IncompleteLUT.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_ITERATIVELINEARSOLVERS_MODULE_H
densecrf/include/Eigen/Jacobi 0 → 100644
View file @ da2c1226
#ifndef EIGEN_JACOBI_MODULE_H
#define EIGEN_JACOBI_MODULE_H
#include "Core"
#include "src/Core/util/DisableStupidWarnings.h"
/** \defgroup Jacobi_Module Jacobi module
* This module provides Jacobi and Givens rotations.
*
* \code
* #include <Eigen/Jacobi>
* \endcode
*
* In addition to listed classes, it defines the two following MatrixBase methods to apply a Jacobi or Givens rotation:
* - MatrixBase::applyOnTheLeft()
* - MatrixBase::applyOnTheRight().
*/
#include "src/Jacobi/Jacobi.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_JACOBI_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/LU 0 → 100644
View file @ da2c1226
#ifndef EIGEN_LU_MODULE_H
#define EIGEN_LU_MODULE_H
#include "Core"
#include "src/Core/util/DisableStupidWarnings.h"
/** \defgroup LU_Module LU module
* This module includes %LU decomposition and related notions such as matrix inversion and determinant.
* This module defines the following MatrixBase methods:
* - MatrixBase::inverse()
* - MatrixBase::determinant()
*
* \code
* #include <Eigen/LU>
* \endcode
*/
#include "src/misc/Solve.h"
#include "src/misc/Kernel.h"
#include "src/misc/Image.h"
#include "src/LU/FullPivLU.h"
#include "src/LU/PartialPivLU.h"
#ifdef EIGEN_USE_LAPACKE
#include "src/LU/PartialPivLU_MKL.h"
#endif
#include "src/LU/Determinant.h"
#include "src/LU/Inverse.h"
#if defined EIGEN_VECTORIZE_SSE
#include "src/LU/arch/Inverse_SSE.h"
#endif
#ifdef EIGEN2_SUPPORT
#include "src/Eigen2Support/LU.h"
#endif
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_LU_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/LeastSquares 0 → 100644
View file @ da2c1226
#ifndef EIGEN_REGRESSION_MODULE_H
#define EIGEN_REGRESSION_MODULE_H
#ifndef EIGEN2_SUPPORT
#error LeastSquares is only available in Eigen2 support mode (define EIGEN2_SUPPORT)
#endif
// exclude from normal eigen3-only documentation
#ifdef EIGEN2_SUPPORT
#include "Core"
#include "src/Core/util/DisableStupidWarnings.h"
#include "Eigenvalues"
#include "Geometry"
/** \defgroup LeastSquares_Module LeastSquares module
* This module provides linear regression and related features.
*
* \code
* #include <Eigen/LeastSquares>
* \endcode
*/
#include "src/Eigen2Support/LeastSquares.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN2_SUPPORT
#endif // EIGEN_REGRESSION_MODULE_H
densecrf/include/Eigen/OrderingMethods 0 → 100644
View file @ da2c1226
#ifndef EIGEN_ORDERINGMETHODS_MODULE_H
#define EIGEN_ORDERINGMETHODS_MODULE_H
#include "SparseCore"
#include "src/Core/util/DisableStupidWarnings.h"
/** \ingroup Sparse_modules
* \defgroup OrderingMethods_Module OrderingMethods module
*
* This module is currently for internal use only.
*
*
* \code
* #include <Eigen/OrderingMethods>
* \endcode
*/
#include "src/OrderingMethods/Amd.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_ORDERINGMETHODS_MODULE_H
densecrf/include/Eigen/PaStiXSupport 0 → 100644
View file @ da2c1226
#ifndef EIGEN_PASTIXSUPPORT_MODULE_H
#define EIGEN_PASTIXSUPPORT_MODULE_H
#include "SparseCore"
#include "src/Core/util/DisableStupidWarnings.h"
#include <complex.h>
extern "C" {
#include <pastix_nompi.h>
#include <pastix.h>
}
#ifdef complex
#undef complex
#endif
/** \ingroup Support_modules
* \defgroup PaStiXSupport_Module PaStiXSupport module
*
* This module provides an interface to the <a href="http://pastix.gforge.inria.fr/">PaSTiX</a> library.
* PaSTiX is a general \b supernodal, \b parallel and \b opensource sparse solver.
* It provides the two following main factorization classes:
* - class PastixLLT : a supernodal, parallel LLt Cholesky factorization.
* - class PastixLDLT: a supernodal, parallel LDLt Cholesky factorization.
* - class PastixLU : a supernodal, parallel LU factorization (optimized for a symmetric pattern).
*
* \code
* #include <Eigen/PaStiXSupport>
* \endcode
*
* In order to use this module, the PaSTiX headers must be accessible from the include paths, and your binary must be linked to the PaSTiX library and its dependencies.
* The dependencies depend on how PaSTiX has been compiled.
* For a cmake based project, you can use our FindPaSTiX.cmake module to help you in this task.
*
*/
#include "src/misc/Solve.h"
#include "src/misc/SparseSolve.h"
#include "src/PaStiXSupport/PaStiXSupport.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_PASTIXSUPPORT_MODULE_H
densecrf/include/Eigen/PardisoSupport 0 → 100644
View file @ da2c1226
#ifndef EIGEN_PARDISOSUPPORT_MODULE_H
#define EIGEN_PARDISOSUPPORT_MODULE_H
#include "SparseCore"
#include "src/Core/util/DisableStupidWarnings.h"
#include <mkl_pardiso.h>
#include <unsupported/Eigen/SparseExtra>
/** \ingroup Support_modules
* \defgroup PardisoSupport_Module PardisoSupport module
*
* This module brings support for the Intel(R) MKL PARDISO direct sparse solvers.
*
* \code
* #include <Eigen/PardisoSupport>
* \endcode
*
* In order to use this module, the MKL headers must be accessible from the include paths, and your binary must be linked to the MKL library and its dependencies.
* See this \ref TopicUsingIntelMKL "page" for more information on MKL-Eigen integration.
*
*/
#include "src/PardisoSupport/PardisoSupport.h"
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_PARDISOSUPPORT_MODULE_H
densecrf/include/Eigen/QR 0 → 100644
View file @ da2c1226
#ifndef EIGEN_QR_MODULE_H
#define EIGEN_QR_MODULE_H
#include "Core"
#include "src/Core/util/DisableStupidWarnings.h"
#include "Cholesky"
#include "Jacobi"
#include "Householder"
/** \defgroup QR_Module QR module
*
*
*
* This module provides various QR decompositions
* This module also provides some MatrixBase methods, including:
* - MatrixBase::qr(),
*
* \code
* #include <Eigen/QR>
* \endcode
*/
#include "src/misc/Solve.h"
#include "src/QR/HouseholderQR.h"
#include "src/QR/FullPivHouseholderQR.h"
#include "src/QR/ColPivHouseholderQR.h"
#ifdef EIGEN_USE_LAPACKE
#include "src/QR/HouseholderQR_MKL.h"
#include "src/QR/ColPivHouseholderQR_MKL.h"
#endif
#ifdef EIGEN2_SUPPORT
#include "src/Eigen2Support/QR.h"
#endif
#include "src/Core/util/ReenableStupidWarnings.h"
#ifdef EIGEN2_SUPPORT
#include "Eigenvalues"
#endif
#endif // EIGEN_QR_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/QtAlignedMalloc 0 → 100644
View file @ da2c1226
#ifndef EIGEN_QTMALLOC_MODULE_H
#define EIGEN_QTMALLOC_MODULE_H
#include "Core"
#if (!EIGEN_MALLOC_ALREADY_ALIGNED)
#include "src/Core/util/DisableStupidWarnings.h"
void *qMalloc(size_t size)
{
return Eigen::internal::aligned_malloc(size);
}
void qFree(void *ptr)
{
Eigen::internal::aligned_free(ptr);
}
void *qRealloc(void *ptr, size_t size)
{
void* newPtr = Eigen::internal::aligned_malloc(size);
memcpy(newPtr, ptr, size);
Eigen::internal::aligned_free(ptr);
return newPtr;
}
#include "src/Core/util/ReenableStupidWarnings.h"
#endif
#endif // EIGEN_QTMALLOC_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/SVD 0 → 100644
View file @ da2c1226
#ifndef EIGEN_SVD_MODULE_H
#define EIGEN_SVD_MODULE_H
#include "QR"
#include "Householder"
#include "Jacobi"
#include "src/Core/util/DisableStupidWarnings.h"
/** \defgroup SVD_Module SVD module
*
*
*
* This module provides SVD decomposition for matrices (both real and complex).
* This decomposition is accessible via the following MatrixBase method:
* - MatrixBase::jacobiSvd()
*
* \code
* #include <Eigen/SVD>
* \endcode
*/
#include "src/misc/Solve.h"
#include "src/SVD/JacobiSVD.h"
#if defined(EIGEN_USE_LAPACKE) && !defined(EIGEN_USE_LAPACKE_STRICT)
#include "src/SVD/JacobiSVD_MKL.h"
#endif
#include "src/SVD/UpperBidiagonalization.h"
#ifdef EIGEN2_SUPPORT
#include "src/Eigen2Support/SVD.h"
#endif
#include "src/Core/util/ReenableStupidWarnings.h"
#endif // EIGEN_SVD_MODULE_H
/* vim: set filetype=cpp et sw=2 ts=2 ai: */
densecrf/include/Eigen/Sparse 0 → 100644
View file @ da2c1226
#ifndef EIGEN_SPARSE_MODULE_H
#define EIGEN_SPARSE_MODULE_H
/** \defgroup Sparse_modules Sparse modules
*
* Meta-module including all related modules:
* - SparseCore
* - OrderingMethods
* - SparseCholesky
* - IterativeLinearSolvers
*
* \code
* #include <Eigen/Sparse>
* \endcode
*/
#include "SparseCore"
#include "OrderingMethods"
#include "SparseCholesky"
#include "IterativeLinearSolvers"
#endif // EIGEN_SPARSE_MODULE_H
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