Commit dbc0b085 authored by Dingquan Yu's avatar Dingquan Yu
Browse files

added test alignment files for dataloader unittest

parent 39d67ba5
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# STOCKHOLM 1.0
#=GS MGYP000179780280/48-90 DE [subseq from] PL=10 UP=0 BIOMES=0000000011000
#=GS MGYP000502978124/9-85 DE [subseq from] PL=11 UP=0 BIOMES=0100000000000
#=GS MGYP000252309144/2-40 DE [subseq from] PL=10 UP=0 BIOMES=0000000010100
#=GS MGYP000308361322/5-70 DE [subseq from] PL=01 UP=0 BIOMES=0110000000000
#=GS MGYP000223778335/1-29 DE [subseq from] PL=01 UP=0 BIOMES=0000000011000
#=GS MGYP000036718232/2-50 DE [subseq from] PL=00 UP=0 BIOMES=0110000000000
#=GS MGYP000262059246/1-65 DE [subseq from] PL=10 UP=0 BIOMES=0110000000000
#=GS MGYP000027820786/2-40 DE [subseq from] PL=00 UP=0 BIOMES=0110000000000
#=GS MGYP000267758348/2-40 DE [subseq from] PL=00 UP=0 BIOMES=0110000000000
#=GS MGYP000076495019/18-59 DE [subseq from] PL=01 UP=0 BIOMES=0101000000000
#=GS MGYP000218021762/10-50 DE [subseq from] PL=01 UP=0 BIOMES=0000000011000
query GPGSEFKVTVCFGRTRVVVPCGDGRMKVFSLIQQAVTRYRKAVAKDPNYWIQVHRLEHGDGGILDLDDILCDVADDKDRLVAVFDEQD
MGYP000179780280/48-90 --GGGMKVTVCFGRTRVVVPCGDGHMKVFSLIQQAVTRYRKAIAK-------------------------------------------
MGYP000502978124/9-85 ----------LFNTVKIVVPCGDGEKTVRELTQLATIRYKKATGKPRLSWVSVHSLKAKEGGILDPDDRLVDVCDDREQLIAYYDEE-
MGYP000252309144/2-40 ------KVTVCFGRTRVVVPCGDGHMKVFSLIQQAVTRYRKAIAK-------------------------------------------
MGYP000308361322/5-70 ---------------------SDGELSVRELTQLATTRYKKATGKARLSWVSVHSLKAKEGGILDPDDRLVDVCDDREQLIAFYDEE-
MGYP000223778335/1-29 ----------------------------------------------------MHRLEHGDGGILDLDDILCDVADDKDRVS-------
MGYP000036718232/2-50 ------KVTVCFDRVRVIVPCGDGDLLVKELTEKAVLRYKKATGKVSCEWIQESR---------------------------------
MGYP000262059246/1-65 ---------------------GDGDISVRELTNLATVRYKKAIGKPLGFYVSVLSLKSYEGGILDPDDCVADVCDDREQLQALFDD--
MGYP000027820786/2-40 ------KVTVCFDSVRVIVPCGNGDLTVCELIERAVSRYRKATNK-------------------------------------------
MGYP000267758348/2-40 ------KVTVCFDAVRVIVPCGNGELTVTELIERAVSRYRKATNK-------------------------------------------
MGYP000076495019/18-59 -PGARMKVTVCFGKTGIVVPCKEGQLRVRELTQQALQRYLKTR---------------------------------------------
MGYP000218021762/10-50 --GGGMKVTVCFGRTGIVVPCKEGQLRVGELTQQALQRYLKTR---------------------------------------------
#=GC RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
//
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# STOCKHOLM 1.0
#=GS MGYP000596977035/1-183 DE [subseq from] PL=00 UP=0 BIOMES=1000000000000
#=GS MGYP000476752113/14-133 DE [subseq from] PL=00 UP=1 BIOMES=1000000000000
query MSTLAEVYTIIEDAEQECRKGDFTNAKAKYQEAIEVLGPQNENLSQNKLSSDVTQAIDLLKQDITAKIQELELLIEKQSSEENNIGMVNNNMLIGSVILNNKSPINGISNARNWDNPAYQ-DTLSPINDPLLMSILNRLQFNLNNDIQLKT-EGGKNSKNSEMKINLRLEQFKKELVLYEQKKFKEYGMKIDEITKENKK
MGYP000596977035/1-183 -------------------------------------------MSQNKLSSDVTQAIDLLKQDITAKIQELELLIEKQSSEENNIGMVNNNMLIGSVILNNKSPINGISNARNWDNPAYQ-DTLSPINDPLLMSILNRLQFNLNNDIQLKT-EGGKNSKNSEMKINLRLEQFKKELVLYEQKKFKEYGMKIDEITKENKK
MGYP000476752113/14-133 ----------------------------------------------------------------------------------------------------------SLAKTRSWDNSRNMGSGLGSSSDPLLISILGKLQSNLINSISEQCKEDPQVLKELDGRIAQQFSQFRKELALYEQKKSKDYNARLEQAIAENKK
#=GC RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
query LANEIGRLRERWDSLVESAKQRRDKQKN
MGYP000596977035/1-183 LANEIGRLRERWDSLVESAKQRRDKQKN
MGYP000476752113/14-133 LSNQILKLRGRWDSLVESAKQRRSRQ--
#=GC RF xxxxxxxxxxxxxxxxxxxxxxxxxxxx
//
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