Merge pull request #405 from aqlaboratory/multimer

Full multimer merge

Merge pull request #405 from aqlaboratory/multimer
Full multimer merge
bb3f51e5 · Christina Floristean · GitHub · ce211367 · c33a0bd6 · bb3f51e5
Unverified Commit bb3f51e5 authored Feb 07, 2024 by Christina Floristean Committed by GitHub Feb 07, 2024
20 changed files
--- a/openfold/utils/argparse.py
+++ b/openfold/utils/argparse.py
--- a/openfold/utils/feats.py
+++ b/openfold/utils/feats.py
--- a/openfold/utils/geometry/__init__.py
+++ b/openfold/utils/geometry/__init__.py
--- a/openfold/utils/geometry/quat_rigid.py
+++ b/openfold/utils/geometry/quat_rigid.py
--- a/openfold/utils/geometry/rigid_matrix_vector.py
+++ b/openfold/utils/geometry/rigid_matrix_vector.py
--- a/openfold/utils/geometry/rotation_matrix.py
+++ b/openfold/utils/geometry/rotation_matrix.py
--- a/openfold/utils/geometry/test_utils.py
+++ b/openfold/utils/geometry/test_utils.py
--- a/openfold/utils/geometry/utils.py
+++ b/openfold/utils/geometry/utils.py
--- a/openfold/utils/geometry/vector.py
+++ b/openfold/utils/geometry/vector.py
--- a/openfold/utils/import_weights.py
+++ b/openfold/utils/import_weights.py
--- a/openfold/utils/loss.py
+++ b/openfold/utils/loss.py
--- a/openfold/utils/multi_chain_permutation.py
+++ b/openfold/utils/multi_chain_permutation.py
--- a/openfold/utils/rigid_utils.py
+++ b/openfold/utils/rigid_utils.py
--- a/openfold/utils/script_utils.py
+++ b/openfold/utils/script_utils.py
--- a/run_pretrained_openfold.py
+++ b/run_pretrained_openfold.py
--- a/scripts/__init__.py
+++ b/scripts/__init__.py
--- a/scripts/convert_of_weights_to_jax.py
+++ b/scripts/convert_of_weights_to_jax.py
--- a/scripts/data_dir_to_fasta.py
+++ b/scripts/data_dir_to_fasta.py
--- a/scripts/deepspeed_inference_test.py
+++ b/scripts/deepspeed_inference_test.py
--- a/scripts/download_alphafold_dbs.sh
+++ b/scripts/download_alphafold_dbs.sh