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Commit 911795ca authored by Gustaf Ahdritz's avatar Gustaf Ahdritz
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Merge branch 'main' of ssh://github.com/aqlaboratory/openfold into main

parents 9b60d737 376c60c7
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run_pretrained_alphafold.py
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...@@ -43,8 +43,6 @@ from openfold.utils.tensor_utils import ( ...@@ -43,8 +43,6 @@ from openfold.utils.tensor_utils import (
tensor_tree_map, tensor_tree_map,
) )
FEAT_PATH = "tests/test_data/sample_feats.pickle"
MAX_TEMPLATE_HITS = 20 MAX_TEMPLATE_HITS = 20
def main(args): def main(args):
...@@ -86,7 +84,7 @@ def main(args): ...@@ -86,7 +84,7 @@ def main(args):
) )
output_dir_base = args.output_dir output_dir_base = args.output_dir
random_seed = args.random_seed random_seed = args.data_random_seed
if random_seed is None: if random_seed is None:
random_seed = random.randrange(sys.maxsize) random_seed = random.randrange(sys.maxsize)
config.data.eval.num_ensemble = num_ensemble config.data.eval.num_ensemble = num_ensemble
...@@ -248,7 +246,7 @@ if __name__ == "__main__": ...@@ -248,7 +246,7 @@ if __name__ == "__main__":
choices=('reduced_dbs', 'full_dbs') choices=('reduced_dbs', 'full_dbs')
) )
parser.add_argument( parser.add_argument(
'--random_seed', type=str, default=None '--data_random_seed', type=str, default=None
) )
args = parser.parse_args() args = parser.parse_args()
......
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