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OpenDAS
OpenFold
Commits
70d6bda5
Commit
70d6bda5
authored
Jan 05, 2022
by
Gustaf Ahdritz
Browse files
Add some more in-place operations
parent
b399eaac
Changes
1
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1 changed file
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openfold/model/evoformer.py
openfold/model/evoformer.py
+5
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openfold/model/evoformer.py
View file @
70d6bda5
...
...
@@ -223,19 +223,19 @@ class EvoformerBlock(nn.Module):
m
=
m
+
self
.
msa_dropout_layer
(
self
.
msa_att_row
(
m
,
z
=
z
,
mask
=
msa_mask
,
chunk_size
=
chunk_size
)
)
m
+
=
self
.
msa_att_col
(
m
,
mask
=
msa_mask
,
chunk_size
=
chunk_size
)
m
=
m
+
self
.
msa_att_col
(
m
,
mask
=
msa_mask
,
chunk_size
=
chunk_size
)
m
=
m
+
self
.
msa_transition
(
m
,
mask
=
msa_trans_mask
,
chunk_size
=
chunk_size
)
z
=
z
+
self
.
outer_product_mean
(
m
,
mask
=
msa_mask
,
chunk_size
=
chunk_size
)
z
+
=
self
.
ps_dropout_row_layer
(
self
.
tri_mul_out
(
z
,
mask
=
pair_mask
))
z
+
=
self
.
ps_dropout_row_layer
(
self
.
tri_mul_in
(
z
,
mask
=
pair_mask
))
z
+
=
self
.
ps_dropout_row_layer
(
z
=
z
+
self
.
ps_dropout_row_layer
(
self
.
tri_mul_out
(
z
,
mask
=
pair_mask
))
z
=
z
+
self
.
ps_dropout_row_layer
(
self
.
tri_mul_in
(
z
,
mask
=
pair_mask
))
z
=
z
+
self
.
ps_dropout_row_layer
(
self
.
tri_att_start
(
z
,
mask
=
pair_mask
,
chunk_size
=
chunk_size
)
)
z
+
=
self
.
ps_dropout_col_layer
(
z
=
z
+
self
.
ps_dropout_col_layer
(
self
.
tri_att_end
(
z
,
mask
=
pair_mask
,
chunk_size
=
chunk_size
)
)
z
=
z
+
self
.
pair_transition
(
...
...
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