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OpenDAS
OpenFold
Commits
61480c36
Commit
61480c36
authored
Jul 14, 2022
by
Gustaf Ahdritz
Browse files
Merge branch 'main' of github.com:aqlaboratory/openfold into main
parents
d537f433
bfa6c7d0
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61480c36
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@@ -177,9 +177,8 @@ For large-scale batch inference, we offer an optional tracing mode, which
massively improves runtimes at the cost of a lengthy model compilation process.
To enable it, add
`--trace_model`
to the inference command.
By default,
[
FlashAttention
](
https://github.com/HazyResearch/flash-attention
)
is enabled in the config. This speeds up computation of the evoformer's MSA
column attention module.
To get a speedup during inference,
[
FlashAttention
](
https://github.com/HazyResearch/flash-attention
)
enable FlashAttention in the config.
Input FASTA files containing multiple sequences are treated as complexes. In
this case, the inference script runs AlphaFold-Gap, a hack proposed
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