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Commit 094e338f authored by Gustaf Ahdritz's avatar Gustaf Ahdritz
Browse files

Fix FASTA parsing again (hopefully for good)

parent c59a85b6
...@@ -80,7 +80,10 @@ def main(args): ...@@ -80,7 +80,10 @@ def main(args):
with open(args.fasta_path, "r") as fp: with open(args.fasta_path, "r") as fp:
data = fp.read() data = fp.read()
lines = [l for l in prot.strip().split('\n') for prot in data.split(">")] lines = [
l.replace('\n', '')
for l in prot.strip().split('\n', 1) for prot in data.split(">")
]
tags, seqs = lines[::2], lines[1::2] tags, seqs = lines[::2], lines[1::2]
for tag, seq in zip(tags, seqs): for tag, seq in zip(tags, seqs):
......
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