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Commit f6d59be5 authored by Shenggan's avatar Shenggan
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add paper link and citation

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README.md
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...@@ -2,9 +2,10 @@ ...@@ -2,9 +2,10 @@
# FastFold # FastFold
![](https://img.shields.io/github/v/release/hpcaitech/FastFold) [![](https://img.shields.io/badge/Paper-PDF-green?style=flat&logo=arXiv&logoColor=green)](https://arxiv.org/abs/2203.00854)
[![GitHub license](https://img.shields.io/github/license/hpcaitech/FastFold.svg)](https://github.com/hpcaitech/FastFold/blob/master/LICENSE)
![](https://img.shields.io/badge/Made%20with-ColossalAI-blueviolet?style=flat) ![](https://img.shields.io/badge/Made%20with-ColossalAI-blueviolet?style=flat)
![](https://img.shields.io/github/v/release/hpcaitech/FastFold)
[![GitHub license](https://img.shields.io/github/license/hpcaitech/FastFold)](https://github.com/hpcaitech/FastFold/blob/main/LICENSE)
Optimizing Protein Structure Prediction Model Training and Inference on GPU Clusters Optimizing Protein Structure Prediction Model Training and Inference on GPU Clusters
...@@ -83,4 +84,12 @@ torchrun --nproc_per_node=1 perf.py --msa-length 128 --res-length 256 --openfold ...@@ -83,4 +84,12 @@ torchrun --nproc_per_node=1 perf.py --msa-length 128 --res-length 256 --openfold
Cite this paper, if you use FastFold in your research publication. Cite this paper, if you use FastFold in your research publication.
``` ```
@misc{cheng2022fastfold,
title={FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours},
author={Shenggan Cheng and Ruidong Wu and Zhongming Yu and Binrui Li and Xiwen Zhang and Jian Peng and Yang You},
year={2022},
eprint={2203.00854},
archivePrefix={arXiv},
primaryClass={cs.LG}
}
``` ```
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