import os os.environ['DGLBACKEND'] = 'mxnet' import dgl import networkx as nx import numpy as np import mxnet as mx def mfunc(edges): return {'m' : edges.src['x']} def rfunc(nodes): msg = mx.nd.sum(nodes.mailbox['m'], 1) return {'x' : nodes.data['x'] + msg} def test_prop_nodes_bfs(): g = dgl.DGLGraph(nx.path_graph(5)) g.ndata['x'] = mx.nd.ones(shape=(5, 2)) g.register_message_func(mfunc) g.register_reduce_func(rfunc) dgl.prop_nodes_bfs(g, 0) # pull nodes using bfs order will result in a cumsum[i] + data[i] + data[i+1] assert np.allclose(g.ndata['x'].asnumpy(), np.array([[2., 2.], [4., 4.], [6., 6.], [8., 8.], [9., 9.]])) def _test_prop_edges_dfs(): g = dgl.DGLGraph(nx.path_graph(5)) g.register_message_func(mfunc) g.register_reduce_func(rfunc) g.ndata['x'] = mx.nd.ones(shape=(5, 2)) dgl.prop_edges_dfs(g, 0) # snr using dfs results in a cumsum assert np.allclose(g.ndata['x'].asnumpy(), np.array([[1., 1.], [2., 2.], [3., 3.], [4., 4.], [5., 5.]])) g.ndata['x'] = mx.nd.ones(shape=(5, 2)) dgl.prop_edges_dfs(g, 0, has_reverse_edge=True) # result is cumsum[i] + cumsum[i-1] assert np.allclose(g.ndata['x'].asnumpy(), np.array([[1., 1.], [3., 3.], [5., 5.], [7., 7.], [9., 9.]])) g.ndata['x'] = mx.nd.ones(shape=(5, 2)) dgl.prop_edges_dfs(g, 0, has_nontree_edge=True) # result is cumsum[i] + cumsum[i+1] assert np.allclose(g.ndata['x'].asnumpy(), np.array([[3., 3.], [5., 5.], [7., 7.], [9., 9.], [5., 5.]])) def test_prop_nodes_topo(): # bi-directional chain g = dgl.DGLGraph(nx.path_graph(5)) # tree tree = dgl.DGLGraph() tree.add_nodes(5) tree.add_edge(1, 0) tree.add_edge(2, 0) tree.add_edge(3, 2) tree.add_edge(4, 2) tree.register_message_func(mfunc) tree.register_reduce_func(rfunc) # init node feature data tree.ndata['x'] = mx.nd.zeros(shape=(5, 2)) # set all leaf nodes to be ones tree.nodes[[1, 3, 4]].data['x'] = mx.nd.ones(shape=(3, 2)) dgl.prop_nodes_topo(tree) # root node get the sum assert np.allclose(tree.nodes[0].data['x'].asnumpy(), np.array([[3., 3.]])) if __name__ == '__main__': test_prop_nodes_bfs() #TODO(zhengda): the test leads to segfault in MXNet on Ubuntu 16.04. #_test_prop_edges_dfs() test_prop_nodes_topo()