import copy import torch import torch.nn.functional as F import pytest import torch.fx import torch.multiprocessing as mp from torch.fx import GraphModule from colossalai.fx import ColoTracer import colossalai from colossalai.utils import free_port from colossalai.core import global_context as gpc from colossalai.fx.graph_module import ColoGraphModule from colossalai.fx.passes.meta_info_prop import MetaInfoProp, TensorMetadata from colossalai.fx.profiler import MetaTensor from evoformer.evoformer import evoformer_base from chunk_codegen import ChunkCodeGen import time def _benchmark_evoformer(model: torch.nn.Module, node, pair): loop = 10 with torch.no_grad(): for _ in range(loop // 4): model(node, pair) torch.cuda.synchronize() time1 = time.time() for _ in range(loop): model(node, pair) torch.cuda.synchronize() time2 = time.time() return (time2 - time1) / loop def benchmark_evoformer(): # data msa_len = 300 pair_len = 800 node = torch.randn(1, msa_len, pair_len, 256).cuda() pair = torch.randn(1, pair_len, pair_len, 128).cuda() # build gm model max_memory = 3000 # MB model = evoformer_base().cuda() # trace the module and replace codegen graph = ColoTracer().trace( model, meta_args={ "node": node.to(torch.device("meta")), "pair": pair.to(torch.device("meta")), }, ) gm_prop = torch.fx.symbolic_trace(model) # must use symbolic_trace interp = MetaInfoProp(gm_prop) interp.propagate( MetaTensor(node, fake_device="cuda:0"), MetaTensor(pair, fake_device="cuda:0") ) # now run it twice to get meta info in graph module, not necessary gm = torch.fx.GraphModule(model, graph) interp = MetaInfoProp(gm) interp.propagate( MetaTensor(node, fake_device="cuda:0"), MetaTensor(pair, fake_device="cuda:0") ) # set code_gen codegen = ChunkCodeGen(gm_prop, max_memory) graph.set_codegen(codegen) gm = ColoGraphModule(model, graph) gm.recompile() # print code = graph.python_code("self").src print(code) time_gm = _benchmark_evoformer(gm, node, pair) print("gm %.4fs" % time_gm) time_openfold = _benchmark_evoformer(model, node, pair) print("openfold %.4fs" % time_openfold) if __name__ == "__main__": benchmark_evoformer()